Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MFSD11-216ENST00000590393 1141 ntBASIC19.97■□□□□ 0.79
CPNE1Q99829 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE1Q99829 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE1Q99829 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.97■□□□□ 0.79
CPNE1Q99829 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.97■□□□□ 0.79
CPNE1Q99829 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE1Q99829 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE1Q99829 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE1Q99829 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE1Q99829 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPNE1Q99829 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE1Q99829 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE1Q99829 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE1Q99829 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE1Q99829 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
CPNE1Q99829 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.96■□□□□ 0.79
CPNE1Q99829 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
CPNE1Q99829 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE1Q99829 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE1Q99829 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE1Q99829 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.96■□□□□ 0.79
CPNE1Q99829 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CPNE1Q99829 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.96■□□□□ 0.79
CPNE1Q99829 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE1Q99829 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CPNE1Q99829 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE1Q99829 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.96■□□□□ 0.79
CPNE1Q99829 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE1Q99829 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE1Q99829 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPNE1Q99829 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE1Q99829 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE1Q99829 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE1Q99829 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE1Q99829 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.95■□□□□ 0.78
CPNE1Q99829 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.95■□□□□ 0.78
CPNE1Q99829 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.95■□□□□ 0.78
CPNE1Q99829 AL031963.3-201ENST00000606441 850 ntBASIC19.95■□□□□ 0.78
CPNE1Q99829 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.95■□□□□ 0.78
CPNE1Q99829 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE1Q99829 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.95■□□□□ 0.78
CPNE1Q99829 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CPNE1Q99829 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPNE1Q99829 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE1Q99829 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
CPNE1Q99829 KRT16P6-202ENST00000425692 1426 ntBASIC19.94■□□□□ 0.78
CPNE1Q99829 CNN2P6-201ENST00000439038 900 ntBASIC19.94■□□□□ 0.78
CPNE1Q99829 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.94■□□□□ 0.78
CPNE1Q99829 AC087623.3-201ENST00000607047 1098 ntBASIC19.94■□□□□ 0.78
CPNE1Q99829 AC105020.6-201ENST00000621523 1217 ntBASIC19.94■□□□□ 0.78
CPNE1Q99829 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE1Q99829 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE1Q99829 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE1Q99829 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE1Q99829 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.94■□□□□ 0.78
CPNE1Q99829 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.94■□□□□ 0.78
CPNE1Q99829 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CPNE1Q99829 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPNE1Q99829 AC068338.2-201ENST00000563278 1430 ntBASIC19.93■□□□□ 0.78
CPNE1Q99829 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE1Q99829 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CPNE1Q99829 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CPNE1Q99829 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE1Q99829 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CPNE1Q99829 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.93■□□□□ 0.78
CPNE1Q99829 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE1Q99829 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE1Q99829 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CPNE1Q99829 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.93■□□□□ 0.78
CPNE1Q99829 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.93■□□□□ 0.78
CPNE1Q99829 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.93■□□□□ 0.78
CPNE1Q99829 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.93■□□□□ 0.78
CPNE1Q99829 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE1Q99829 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE1Q99829 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE1Q99829 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE1Q99829 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.93■□□□□ 0.78
CPNE1Q99829 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.93■□□□□ 0.78
CPNE1Q99829 KRT8P20-201ENST00000423953 1409 ntBASIC19.93■□□□□ 0.78
CPNE1Q99829 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPNE1Q99829 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE1Q99829 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE1Q99829 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE1Q99829 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE1Q99829 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.92■□□□□ 0.78
CPNE1Q99829 KRT18P68-201ENST00000392293 1000 ntBASIC19.92■□□□□ 0.78
CPNE1Q99829 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CPNE1Q99829 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.92■□□□□ 0.78
CPNE1Q99829 DUX4L16-201ENST00000555130 1264 ntBASIC19.92■□□□□ 0.78
CPNE1Q99829 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.92■□□□□ 0.78
CPNE1Q99829 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE1Q99829 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE1Q99829 BX323043.1-201ENST00000641006 1765 ntBASIC19.92■□□□□ 0.78
CPNE1Q99829 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE1Q99829 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.92■□□□□ 0.78
CPNE1Q99829 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CPNE1Q99829 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE1Q99829 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPNE1Q99829 AC005332.7-201ENST00000614046 2005 ntBASIC19.92■□□□□ 0.78
CPNE1Q99829 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms