Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHOX2BQ99453 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHOX2BQ99453 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHOX2BQ99453 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.22■□□□□ 0.83
PHOX2BQ99453 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHOX2BQ99453 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.22■□□□□ 0.83
PHOX2BQ99453 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PHOX2BQ99453 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.22■□□□□ 0.83
PHOX2BQ99453 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.22■□□□□ 0.83
PHOX2BQ99453 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.22■□□□□ 0.83
PHOX2BQ99453 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.22■□□□□ 0.83
PHOX2BQ99453 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHOX2BQ99453 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.22■□□□□ 0.83
PHOX2BQ99453 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.22■□□□□ 0.83
PHOX2BQ99453 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.22■□□□□ 0.83
PHOX2BQ99453 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PHOX2BQ99453 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHOX2BQ99453 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PHOX2BQ99453 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.22■□□□□ 0.83
PHOX2BQ99453 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
PHOX2BQ99453 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PHOX2BQ99453 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.21■□□□□ 0.83
PHOX2BQ99453 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHOX2BQ99453 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PHOX2BQ99453 RNF152P1-201ENST00000397754 604 ntBASIC20.21■□□□□ 0.83
PHOX2BQ99453 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.21■□□□□ 0.83
PHOX2BQ99453 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.21■□□□□ 0.83
PHOX2BQ99453 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.21■□□□□ 0.83
PHOX2BQ99453 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.21■□□□□ 0.83
PHOX2BQ99453 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.21■□□□□ 0.83
PHOX2BQ99453 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.21■□□□□ 0.83
PHOX2BQ99453 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHOX2BQ99453 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PHOX2BQ99453 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.21■□□□□ 0.83
PHOX2BQ99453 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PHOX2BQ99453 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.2■□□□□ 0.82
PHOX2BQ99453 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.2■□□□□ 0.82
PHOX2BQ99453 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHOX2BQ99453 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHOX2BQ99453 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHOX2BQ99453 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PHOX2BQ99453 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHOX2BQ99453 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.2■□□□□ 0.82
PHOX2BQ99453 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.2■□□□□ 0.82
PHOX2BQ99453 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHOX2BQ99453 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.2■□□□□ 0.82
PHOX2BQ99453 GUSBP5-202ENST00000510805 1989 ntBASIC20.2■□□□□ 0.82
PHOX2BQ99453 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PHOX2BQ99453 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PHOX2BQ99453 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHOX2BQ99453 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.2■□□□□ 0.82
PHOX2BQ99453 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PHOX2BQ99453 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHOX2BQ99453 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PHOX2BQ99453 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PHOX2BQ99453 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
PHOX2BQ99453 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PHOX2BQ99453 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHOX2BQ99453 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.19■□□□□ 0.82
PHOX2BQ99453 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHOX2BQ99453 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.19■□□□□ 0.82
PHOX2BQ99453 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.19■□□□□ 0.82
PHOX2BQ99453 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PHOX2BQ99453 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PHOX2BQ99453 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.19■□□□□ 0.82
PHOX2BQ99453 FAM87A-204ENST00000613235 858 ntBASIC20.19■□□□□ 0.82
PHOX2BQ99453 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.19■□□□□ 0.82
PHOX2BQ99453 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.19■□□□□ 0.82
PHOX2BQ99453 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHOX2BQ99453 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PHOX2BQ99453 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.18■□□□□ 0.82
PHOX2BQ99453 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.18■□□□□ 0.82
PHOX2BQ99453 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.18■□□□□ 0.82
PHOX2BQ99453 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.18■□□□□ 0.82
PHOX2BQ99453 FAM207BP-201ENST00000447172 505 ntBASIC20.18■□□□□ 0.82
PHOX2BQ99453 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.18■□□□□ 0.82
PHOX2BQ99453 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
PHOX2BQ99453 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.18■□□□□ 0.82
PHOX2BQ99453 C2orf69P3-201ENST00000565542 1120 ntBASIC20.18■□□□□ 0.82
PHOX2BQ99453 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.18■□□□□ 0.82
PHOX2BQ99453 AL121956.5-201ENST00000625261 221 ntBASIC20.18■□□□□ 0.82
PHOX2BQ99453 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.18■□□□□ 0.82
PHOX2BQ99453 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.18■□□□□ 0.82
PHOX2BQ99453 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHOX2BQ99453 AC127496.7-201ENST00000625110 1798 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms