Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CITED4Q96RK1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.04■□□□□ 0.32
CITED4Q96RK1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.04■□□□□ 0.32
CITED4Q96RK1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CITED4Q96RK1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.04■□□□□ 0.32
CITED4Q96RK1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.04■□□□□ 0.32
CITED4Q96RK1 AC104564.3-201ENST00000582367 638 ntBASIC17.04■□□□□ 0.32
CITED4Q96RK1 MIR6722-201ENST00000617286 78 ntBASIC17.04■□□□□ 0.32
CITED4Q96RK1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CITED4Q96RK1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.04■□□□□ 0.32
CITED4Q96RK1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CITED4Q96RK1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CITED4Q96RK1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 AC125437.2-201ENST00000625180 2167 ntBASIC17.04■□□□□ 0.32
CITED4Q96RK1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CITED4Q96RK1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CITED4Q96RK1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CITED4Q96RK1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CITED4Q96RK1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 AL512631.2-201ENST00000604634 923 ntBASIC17.03■□□□□ 0.32
CITED4Q96RK1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CITED4Q96RK1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CITED4Q96RK1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 AC079598.2-202ENST00000546624 1451 ntBASIC17.03■□□□□ 0.32
CITED4Q96RK1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CITED4Q96RK1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CITED4Q96RK1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CITED4Q96RK1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CITED4Q96RK1 AL390961.4-201ENST00000623958 2535 ntBASIC17.03■□□□□ 0.32
CITED4Q96RK1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CITED4Q96RK1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CITED4Q96RK1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CITED4Q96RK1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.03■□□□□ 0.32
CITED4Q96RK1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.02■□□□□ 0.32
CITED4Q96RK1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.02■□□□□ 0.32
CITED4Q96RK1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.02■□□□□ 0.32
CITED4Q96RK1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CITED4Q96RK1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.02■□□□□ 0.32
CITED4Q96RK1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CITED4Q96RK1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CITED4Q96RK1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.02■□□□□ 0.32
CITED4Q96RK1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.02■□□□□ 0.32
CITED4Q96RK1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CITED4Q96RK1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.02■□□□□ 0.32
CITED4Q96RK1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CITED4Q96RK1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CITED4Q96RK1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CITED4Q96RK1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.02■□□□□ 0.31
CITED4Q96RK1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CITED4Q96RK1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CITED4Q96RK1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CITED4Q96RK1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
CITED4Q96RK1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CITED4Q96RK1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CITED4Q96RK1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CITED4Q96RK1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms