Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 RN7SL471P-201ENST00000580476 299 ntBASIC15.53■□□□□ 0.08
DUX3Q96PT4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
DUX3Q96PT4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUX3Q96PT4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DUX3Q96PT4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.52■□□□□ 0.08
DUX3Q96PT4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DUX3Q96PT4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DUX3Q96PT4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DUX3Q96PT4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DUX3Q96PT4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.52■□□□□ 0.08
DUX3Q96PT4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
DUX3Q96PT4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
DUX3Q96PT4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.52■□□□□ 0.08
DUX3Q96PT4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
DUX3Q96PT4 RPS2P4-201ENST00000476944 856 ntBASIC15.52■□□□□ 0.08
DUX3Q96PT4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.52■□□□□ 0.08
DUX3Q96PT4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DUX3Q96PT4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
DUX3Q96PT4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
DUX3Q96PT4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DUX3Q96PT4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.52■□□□□ 0.08
DUX3Q96PT4 AC120498.8-201ENST00000614275 531 ntBASIC15.52■□□□□ 0.08
DUX3Q96PT4 AL023875.1-201ENST00000640777 796 ntBASIC15.52■□□□□ 0.08
DUX3Q96PT4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.52■□□□□ 0.07
DUX3Q96PT4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.52■□□□□ 0.07
DUX3Q96PT4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
DUX3Q96PT4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
DUX3Q96PT4 AC124283.5-201ENST00000624661 1809 ntBASIC15.52■□□□□ 0.07
DUX3Q96PT4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
DUX3Q96PT4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DUX3Q96PT4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
DUX3Q96PT4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DUX3Q96PT4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX3Q96PT4 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.51■□□□□ 0.07
DUX3Q96PT4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.51■□□□□ 0.07
DUX3Q96PT4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.51■□□□□ 0.07
DUX3Q96PT4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DUX3Q96PT4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX3Q96PT4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DUX3Q96PT4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX3Q96PT4 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.51■□□□□ 0.07
DUX3Q96PT4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DUX3Q96PT4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.51■□□□□ 0.07
DUX3Q96PT4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.51■□□□□ 0.07
DUX3Q96PT4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.51■□□□□ 0.07
DUX3Q96PT4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DUX3Q96PT4 AL137060.1-201ENST00000618151 2648 ntBASIC15.51■□□□□ 0.07
DUX3Q96PT4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX3Q96PT4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX3Q96PT4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.51■□□□□ 0.07
DUX3Q96PT4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.51■□□□□ 0.07
DUX3Q96PT4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
DUX3Q96PT4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DUX3Q96PT4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX3Q96PT4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX3Q96PT4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX3Q96PT4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DUX3Q96PT4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DUX3Q96PT4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
DUX3Q96PT4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.5■□□□□ 0.07
DUX3Q96PT4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DUX3Q96PT4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.5■□□□□ 0.07
DUX3Q96PT4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DUX3Q96PT4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DUX3Q96PT4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DUX3Q96PT4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
DUX3Q96PT4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DUX3Q96PT4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.5■□□□□ 0.07
DUX3Q96PT4 AC008550.1-201ENST00000511500 884 ntBASIC15.5■□□□□ 0.07
DUX3Q96PT4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.5■□□□□ 0.07
DUX3Q96PT4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.5■□□□□ 0.07
DUX3Q96PT4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.5■□□□□ 0.07
DUX3Q96PT4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.5■□□□□ 0.07
DUX3Q96PT4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.5■□□□□ 0.07
DUX3Q96PT4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
DUX3Q96PT4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DUX3Q96PT4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DUX3Q96PT4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DUX3Q96PT4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.5■□□□□ 0.07
DUX3Q96PT4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
DUX3Q96PT4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DUX3Q96PT4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.49■□□□□ 0.07
DUX3Q96PT4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.49■□□□□ 0.07
DUX3Q96PT4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.49■□□□□ 0.07
DUX3Q96PT4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.49■□□□□ 0.07
DUX3Q96PT4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
DUX3Q96PT4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
DUX3Q96PT4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
DUX3Q96PT4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
DUX3Q96PT4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DUX3Q96PT4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms