Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 AL512408.1-201ENST00000569378 2000 ntBASIC20.6■□□□□ 0.89
RPRD1AQ96P16 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 LINC01006-201ENST00000333319 2292 ntBASIC20.59■□□□□ 0.89
RPRD1AQ96P16 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPRD1AQ96P16 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.58■□□□□ 0.89
RPRD1AQ96P16 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPRD1AQ96P16 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RPRD1AQ96P16 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.58■□□□□ 0.89
RPRD1AQ96P16 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPRD1AQ96P16 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RPRD1AQ96P16 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.58■□□□□ 0.89
RPRD1AQ96P16 RPS2P52-201ENST00000469610 820 ntBASIC20.58■□□□□ 0.89
RPRD1AQ96P16 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.58■□□□□ 0.89
RPRD1AQ96P16 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.58■□□□□ 0.89
RPRD1AQ96P16 AC069544.1-201ENST00000609399 999 ntBASIC20.58■□□□□ 0.89
RPRD1AQ96P16 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPRD1AQ96P16 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPRD1AQ96P16 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.58■□□□□ 0.88
RPRD1AQ96P16 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPRD1AQ96P16 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPRD1AQ96P16 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.58■□□□□ 0.88
RPRD1AQ96P16 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPRD1AQ96P16 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RPRD1AQ96P16 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.58■□□□□ 0.88
RPRD1AQ96P16 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPRD1AQ96P16 AC124283.5-201ENST00000624661 1809 ntBASIC20.57■□□□□ 0.88
RPRD1AQ96P16 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPRD1AQ96P16 PRORSD1P-201ENST00000295112 541 ntBASIC20.57■□□□□ 0.88
RPRD1AQ96P16 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPRD1AQ96P16 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPRD1AQ96P16 KRT16P6-202ENST00000425692 1426 ntBASIC20.57■□□□□ 0.88
RPRD1AQ96P16 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPRD1AQ96P16 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.57■□□□□ 0.88
RPRD1AQ96P16 AC233263.1-201ENST00000578059 224 ntBASIC20.57■□□□□ 0.88
RPRD1AQ96P16 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.57■□□□□ 0.88
RPRD1AQ96P16 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.57■□□□□ 0.88
RPRD1AQ96P16 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPRD1AQ96P16 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RPRD1AQ96P16 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPRD1AQ96P16 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.55■□□□□ 0.88
RPRD1AQ96P16 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms