Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS33AQ96AX1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 AC005332.7-201ENST00000614046 2005 ntBASIC19.15■□□□□ 0.66
VPS33AQ96AX1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.15■□□□□ 0.66
VPS33AQ96AX1 TREX1-205ENST00000625293 1783 ntBASIC19.15■□□□□ 0.66
VPS33AQ96AX1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 MIR638-201ENST00000385237 100 ntBASIC19.15■□□□□ 0.66
VPS33AQ96AX1 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.15■□□□□ 0.66
VPS33AQ96AX1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 SLC7A5P1-201ENST00000568957 537 ntBASIC19.15■□□□□ 0.66
VPS33AQ96AX1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS33AQ96AX1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.14■□□□□ 0.66
VPS33AQ96AX1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VPS33AQ96AX1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.14■□□□□ 0.66
VPS33AQ96AX1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VPS33AQ96AX1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.14■□□□□ 0.66
VPS33AQ96AX1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS33AQ96AX1 BX323043.1-201ENST00000641006 1765 ntBASIC19.14■□□□□ 0.65
VPS33AQ96AX1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 YBX1P1-201ENST00000445822 960 ntBASIC19.13■□□□□ 0.65
VPS33AQ96AX1 KRT18P14-201ENST00000534205 1250 ntBASIC19.13■□□□□ 0.65
VPS33AQ96AX1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS33AQ96AX1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 CDV3P1-201ENST00000471403 739 ntBASIC19.12■□□□□ 0.65
VPS33AQ96AX1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms