Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL26A1Q96A83 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL26A1Q96A83 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.28■□□□□ 0.68
COL26A1Q96A83 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.28■□□□□ 0.68
COL26A1Q96A83 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.28■□□□□ 0.68
COL26A1Q96A83 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL26A1Q96A83 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
COL26A1Q96A83 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.28■□□□□ 0.68
COL26A1Q96A83 AC007225.1-201ENST00000566331 1836 ntBASIC19.28■□□□□ 0.68
COL26A1Q96A83 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
COL26A1Q96A83 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
COL26A1Q96A83 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL26A1Q96A83 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL26A1Q96A83 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL26A1Q96A83 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL26A1Q96A83 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.27■□□□□ 0.68
COL26A1Q96A83 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.27■□□□□ 0.68
COL26A1Q96A83 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
COL26A1Q96A83 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.27■□□□□ 0.68
COL26A1Q96A83 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.68
COL26A1Q96A83 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.27■□□□□ 0.68
COL26A1Q96A83 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL26A1Q96A83 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL26A1Q96A83 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.27■□□□□ 0.68
COL26A1Q96A83 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL26A1Q96A83 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL26A1Q96A83 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL26A1Q96A83 AC027702.1-201ENST00000563810 1770 ntBASIC19.27■□□□□ 0.67
COL26A1Q96A83 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.26■□□□□ 0.67
COL26A1Q96A83 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.26■□□□□ 0.67
COL26A1Q96A83 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.26■□□□□ 0.67
COL26A1Q96A83 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.26■□□□□ 0.67
COL26A1Q96A83 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
COL26A1Q96A83 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
COL26A1Q96A83 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.26■□□□□ 0.67
COL26A1Q96A83 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL26A1Q96A83 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL26A1Q96A83 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL26A1Q96A83 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL26A1Q96A83 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL26A1Q96A83 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL26A1Q96A83 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL26A1Q96A83 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL26A1Q96A83 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL26A1Q96A83 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL26A1Q96A83 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL26A1Q96A83 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL26A1Q96A83 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL26A1Q96A83 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL26A1Q96A83 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COL26A1Q96A83 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL26A1Q96A83 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL26A1Q96A83 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL26A1Q96A83 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL26A1Q96A83 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL26A1Q96A83 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL26A1Q96A83 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL26A1Q96A83 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.24■□□□□ 0.67
COL26A1Q96A83 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL26A1Q96A83 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL26A1Q96A83 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.24■□□□□ 0.67
COL26A1Q96A83 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL26A1Q96A83 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.24■□□□□ 0.67
COL26A1Q96A83 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.24■□□□□ 0.67
COL26A1Q96A83 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.24■□□□□ 0.67
COL26A1Q96A83 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL26A1Q96A83 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL26A1Q96A83 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
COL26A1Q96A83 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL26A1Q96A83 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL26A1Q96A83 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
COL26A1Q96A83 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms