Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RPGRQ92834 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.72■■□□□ 1.55
RPGRQ92834 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
RPGRQ92834 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RPGRQ92834 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RPGRQ92834 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC24.72■■□□□ 1.55
RPGRQ92834 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.72■■□□□ 1.55
RPGRQ92834 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC24.72■■□□□ 1.55
RPGRQ92834 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.72■■□□□ 1.55
RPGRQ92834 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RPGRQ92834 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.71■■□□□ 1.55
RPGRQ92834 KRT8P17-201ENST00000453110 1448 ntBASIC24.71■■□□□ 1.55
RPGRQ92834 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RPGRQ92834 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RPGRQ92834 CRAT-202ENST00000393384 973 ntTSL 2 BASIC24.71■■□□□ 1.55
RPGRQ92834 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.71■■□□□ 1.55
RPGRQ92834 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.71■■□□□ 1.55
RPGRQ92834 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.71■■□□□ 1.55
RPGRQ92834 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC24.71■■□□□ 1.55
RPGRQ92834 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RPGRQ92834 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.71■■□□□ 1.55
RPGRQ92834 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
RPGRQ92834 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.71■■□□□ 1.55
RPGRQ92834 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.71■■□□□ 1.55
RPGRQ92834 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
RPGRQ92834 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.7■■□□□ 1.55
RPGRQ92834 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
RPGRQ92834 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
RPGRQ92834 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.7■■□□□ 1.54
RPGRQ92834 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.7■■□□□ 1.54
RPGRQ92834 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
RPGRQ92834 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RPGRQ92834 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RPGRQ92834 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
RPGRQ92834 SLC25A3P1-201ENST00000443844 931 ntBASIC24.7■■□□□ 1.54
RPGRQ92834 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC24.7■■□□□ 1.54
RPGRQ92834 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.7■■□□□ 1.54
RPGRQ92834 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RPGRQ92834 AL031985.4-201ENST00000642138 673 ntBASIC24.7■■□□□ 1.54
RPGRQ92834 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RPGRQ92834 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.7■■□□□ 1.54
RPGRQ92834 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RPGRQ92834 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RPGRQ92834 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RPGRQ92834 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
RPGRQ92834 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RPGRQ92834 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RPGRQ92834 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RPGRQ92834 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.69■■□□□ 1.54
RPGRQ92834 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RPGRQ92834 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
RPGRQ92834 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RPGRQ92834 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RPGRQ92834 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC24.69■■□□□ 1.54
RPGRQ92834 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.69■■□□□ 1.54
RPGRQ92834 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RPGRQ92834 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
RPGRQ92834 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
RPGRQ92834 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RPGRQ92834 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RPGRQ92834 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.69■■□□□ 1.54
RPGRQ92834 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.69■■□□□ 1.54
RPGRQ92834 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.69■■□□□ 1.54
RPGRQ92834 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RPGRQ92834 AL121603.2-201ENST00000557373 2117 ntBASIC24.68■■□□□ 1.54
RPGRQ92834 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.68■■□□□ 1.54
RPGRQ92834 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RPGRQ92834 AP006587.1-201ENST00000534129 1502 ntBASIC24.68■■□□□ 1.54
RPGRQ92834 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.68■■□□□ 1.54
RPGRQ92834 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.68■■□□□ 1.54
RPGRQ92834 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.68■■□□□ 1.54
RPGRQ92834 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.68■■□□□ 1.54
RPGRQ92834 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.68■■□□□ 1.54
RPGRQ92834 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.68■■□□□ 1.54
RPGRQ92834 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
RPGRQ92834 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.68■■□□□ 1.54
RPGRQ92834 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RPGRQ92834 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RPGRQ92834 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RPGRQ92834 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
RPGRQ92834 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RPGRQ92834 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.67■■□□□ 1.54
RPGRQ92834 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RPGRQ92834 RNF146-204ENST00000476956 884 ntTSL 2 BASIC24.67■■□□□ 1.54
RPGRQ92834 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
RPGRQ92834 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.67■■□□□ 1.54
RPGRQ92834 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC24.67■■□□□ 1.54
RPGRQ92834 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RPGRQ92834 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.67■■□□□ 1.54
RPGRQ92834 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RPGRQ92834 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.67■■□□□ 1.54
RPGRQ92834 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RPGRQ92834 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.67■■□□□ 1.54
RPGRQ92834 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RPGRQ92834 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RPGRQ92834 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RPGRQ92834 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RPGRQ92834 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RPGRQ92834 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.66■■□□□ 1.54
RPGRQ92834 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms