Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX1Q92499 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
DDX1Q92499 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX1Q92499 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
DDX1Q92499 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX1Q92499 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.3■■□□□ 1
DDX1Q92499 LSM12P1-201ENST00000411836 588 ntBASIC21.3■■□□□ 1
DDX1Q92499 BX276092.2-201ENST00000417668 665 ntBASIC21.3■■□□□ 1
DDX1Q92499 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.3■■□□□ 1
DDX1Q92499 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.3■■□□□ 1
DDX1Q92499 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.3■■□□□ 1
DDX1Q92499 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.3■■□□□ 1
DDX1Q92499 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX1Q92499 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
DDX1Q92499 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.3■■□□□ 1
DDX1Q92499 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.3■■□□□ 1
DDX1Q92499 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX1Q92499 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
DDX1Q92499 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DDX1Q92499 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DDX1Q92499 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX1Q92499 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX1Q92499 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.29■■□□□ 1
DDX1Q92499 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.29■■□□□ 1
DDX1Q92499 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX1Q92499 MIPEPP3-201ENST00000412105 444 ntBASIC21.29■■□□□ 1
DDX1Q92499 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX1Q92499 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
DDX1Q92499 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX1Q92499 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
DDX1Q92499 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX1Q92499 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX1Q92499 KRT8P20-201ENST00000423953 1409 ntBASIC21.29■■□□□ 1
DDX1Q92499 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
DDX1Q92499 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
DDX1Q92499 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX1Q92499 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.28■■□□□ 1
DDX1Q92499 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX1Q92499 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX1Q92499 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.28■■□□□ 1
DDX1Q92499 AC098590.1-201ENST00000468126 897 ntBASIC21.28■■□□□ 1
DDX1Q92499 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.28■■□□□ 1
DDX1Q92499 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX1Q92499 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX1Q92499 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
DDX1Q92499 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX1Q92499 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX1Q92499 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX1Q92499 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.28■■□□□ 1
DDX1Q92499 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
DDX1Q92499 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.28■■□□□ 1
DDX1Q92499 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX1Q92499 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX1Q92499 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX1Q92499 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
DDX1Q92499 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
DDX1Q92499 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.27■■□□□ 1
DDX1Q92499 TMEM179-206ENST00000616017 1645 ntBASIC21.27■■□□□ 1
DDX1Q92499 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX1Q92499 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.27■■□□□ 1
DDX1Q92499 AL596275.1-201ENST00000423464 877 ntBASIC21.27■■□□□ 1
DDX1Q92499 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.27■■□□□ 1
DDX1Q92499 AC023632.3-201ENST00000521633 145 ntBASIC21.27■■□□□ 1
DDX1Q92499 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.27■■□□□ 1
DDX1Q92499 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.27■■□□□ 1
DDX1Q92499 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX1Q92499 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX1Q92499 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX1Q92499 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX1Q92499 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
DDX1Q92499 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
DDX1Q92499 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.27■□□□□ 0.99
DDX1Q92499 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX1Q92499 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.26■□□□□ 0.99
DDX1Q92499 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.26■□□□□ 0.99
DDX1Q92499 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.26■□□□□ 0.99
DDX1Q92499 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX1Q92499 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX1Q92499 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX1Q92499 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.26■□□□□ 0.99
DDX1Q92499 PKD1P6-201ENST00000343738 4769 ntBASIC21.26■□□□□ 0.99
DDX1Q92499 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.26■□□□□ 0.99
DDX1Q92499 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
DDX1Q92499 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX1Q92499 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.26■□□□□ 0.99
DDX1Q92499 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX1Q92499 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms