Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC44A1Q8WWI5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLC44A1Q8WWI5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLC44A1Q8WWI5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC44A1Q8WWI5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC44A1Q8WWI5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A1Q8WWI5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 TERF1P5-201ENST00000477545 1207 ntBASIC20■□□□□ 0.79
SLC44A1Q8WWI5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLC44A1Q8WWI5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 KRT8P17-201ENST00000453110 1448 ntBASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC44A1Q8WWI5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 AC004408.2-201ENST00000623613 2777 ntBASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 AL162412.1-201ENST00000567129 965 ntBASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A1Q8WWI5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 AC010536.3-201ENST00000620306 533 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms