Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF139Q8WU17 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF139Q8WU17 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF139Q8WU17 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RNF139Q8WU17 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RNF139Q8WU17 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF139Q8WU17 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RNF139Q8WU17 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF139Q8WU17 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF139Q8WU17 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF139Q8WU17 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
RNF139Q8WU17 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF139Q8WU17 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF139Q8WU17 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF139Q8WU17 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF139Q8WU17 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.98■□□□□ 0.95
RNF139Q8WU17 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF139Q8WU17 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF139Q8WU17 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RNF139Q8WU17 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF139Q8WU17 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF139Q8WU17 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF139Q8WU17 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF139Q8WU17 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF139Q8WU17 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF139Q8WU17 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.97■□□□□ 0.95
RNF139Q8WU17 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF139Q8WU17 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF139Q8WU17 AC006058.3-201ENST00000606217 1069 ntBASIC20.97■□□□□ 0.95
RNF139Q8WU17 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF139Q8WU17 AL512408.1-201ENST00000569378 2000 ntBASIC20.97■□□□□ 0.95
RNF139Q8WU17 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF139Q8WU17 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF139Q8WU17 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF139Q8WU17 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
RNF139Q8WU17 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF139Q8WU17 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF139Q8WU17 KRT8P20-201ENST00000423953 1409 ntBASIC20.96■□□□□ 0.95
RNF139Q8WU17 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF139Q8WU17 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF139Q8WU17 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF139Q8WU17 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF139Q8WU17 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF139Q8WU17 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RNF139Q8WU17 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF139Q8WU17 KRT18P29-201ENST00000397031 1267 ntBASIC20.96■□□□□ 0.95
RNF139Q8WU17 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.96■□□□□ 0.95
RNF139Q8WU17 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF139Q8WU17 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF139Q8WU17 AC008687.6-201ENST00000596318 630 ntBASIC20.96■□□□□ 0.95
RNF139Q8WU17 AC008403.3-201ENST00000598924 454 ntBASIC20.96■□□□□ 0.95
RNF139Q8WU17 AL031963.3-201ENST00000606441 850 ntBASIC20.96■□□□□ 0.95
RNF139Q8WU17 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF139Q8WU17 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
RNF139Q8WU17 PTBP1P-201ENST00000554374 1601 ntBASIC20.96■□□□□ 0.95
RNF139Q8WU17 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF139Q8WU17 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
RNF139Q8WU17 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF139Q8WU17 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF139Q8WU17 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 KRT17P3-201ENST00000420566 1262 ntBASIC20.95■□□□□ 0.94
RNF139Q8WU17 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF139Q8WU17 ITM2C-210ENST00000620962 501 ntBASIC20.95■□□□□ 0.94
RNF139Q8WU17 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF139Q8WU17 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF139Q8WU17 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF139Q8WU17 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF139Q8WU17 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF139Q8WU17 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF139Q8WU17 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF139Q8WU17 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF139Q8WU17 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF139Q8WU17 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF139Q8WU17 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.94■□□□□ 0.94
RNF139Q8WU17 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF139Q8WU17 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF139Q8WU17 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF139Q8WU17 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF139Q8WU17 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF139Q8WU17 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF139Q8WU17 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RNF139Q8WU17 TMEM191A-211ENST00000637163 1067 ntBASIC20.94■□□□□ 0.94
RNF139Q8WU17 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms