Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SNED1Q8TER0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.47■■□□□ 1.51
SNED1Q8TER0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 TSPY14P-201ENST00000303979 915 ntBASIC24.46■■□□□ 1.51
SNED1Q8TER0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC24.46■■□□□ 1.51
SNED1Q8TER0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
SNED1Q8TER0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.46■■□□□ 1.51
SNED1Q8TER0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC24.46■■□□□ 1.51
SNED1Q8TER0 B3GAT3P1-201ENST00000471720 806 ntBASIC24.46■■□□□ 1.51
SNED1Q8TER0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.46■■□□□ 1.51
SNED1Q8TER0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.46■■□□□ 1.51
SNED1Q8TER0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.46■■□□□ 1.51
SNED1Q8TER0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
SNED1Q8TER0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNED1Q8TER0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
SNED1Q8TER0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
SNED1Q8TER0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.45■■□□□ 1.51
SNED1Q8TER0 FAM87A-204ENST00000613235 858 ntBASIC24.45■■□□□ 1.51
SNED1Q8TER0 AC244015.2-201ENST00000616358 1861 ntBASIC24.45■■□□□ 1.5
SNED1Q8TER0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SNED1Q8TER0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SNED1Q8TER0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SNED1Q8TER0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNED1Q8TER0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNED1Q8TER0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNED1Q8TER0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNED1Q8TER0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNED1Q8TER0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNED1Q8TER0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNED1Q8TER0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC24.44■■□□□ 1.5
SNED1Q8TER0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
SNED1Q8TER0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
SNED1Q8TER0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNED1Q8TER0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNED1Q8TER0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC24.43■■□□□ 1.5
SNED1Q8TER0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SNED1Q8TER0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNED1Q8TER0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNED1Q8TER0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.43■■□□□ 1.5
SNED1Q8TER0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SNED1Q8TER0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNED1Q8TER0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNED1Q8TER0 INGX-201ENST00000359239 846 ntBASIC24.43■■□□□ 1.5
SNED1Q8TER0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SNED1Q8TER0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNED1Q8TER0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.43■■□□□ 1.5
SNED1Q8TER0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNED1Q8TER0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
SNED1Q8TER0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.43■■□□□ 1.5
SNED1Q8TER0 AL031985.4-201ENST00000642138 673 ntBASIC24.43■■□□□ 1.5
SNED1Q8TER0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNED1Q8TER0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.42■■□□□ 1.5
SNED1Q8TER0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.42■■□□□ 1.5
SNED1Q8TER0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SNED1Q8TER0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNED1Q8TER0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC24.42■■□□□ 1.5
SNED1Q8TER0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.42■■□□□ 1.5
SNED1Q8TER0 AC022616.7-201ENST00000525383 220 ntBASIC24.42■■□□□ 1.5
SNED1Q8TER0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.42■■□□□ 1.5
SNED1Q8TER0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC24.42■■□□□ 1.5
SNED1Q8TER0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.42■■□□□ 1.5
SNED1Q8TER0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
SNED1Q8TER0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.42■■□□□ 1.5
SNED1Q8TER0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNED1Q8TER0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.42■■□□□ 1.5
SNED1Q8TER0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SNED1Q8TER0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SNED1Q8TER0 FBXW4P1-201ENST00000426721 2239 ntBASIC24.42■■□□□ 1.5
SNED1Q8TER0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.41■■□□□ 1.5
SNED1Q8TER0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.41■■□□□ 1.5
SNED1Q8TER0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNED1Q8TER0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNED1Q8TER0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC24.41■■□□□ 1.5
SNED1Q8TER0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNED1Q8TER0 FSCN1P1-201ENST00000568912 1481 ntBASIC24.41■■□□□ 1.5
SNED1Q8TER0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNED1Q8TER0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms