Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 KRT8P20-201ENST00000423953 1409 ntBASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZSWIM2Q8NEG5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 TCF3P1-201ENST00000423021 1937 ntBASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ZSWIM2Q8NEG5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 TSPY20P-201ENST00000450910 630 ntBASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZSWIM2Q8NEG5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.77■■□□□ 1.07
ZSWIM2Q8NEG5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
ZSWIM2Q8NEG5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ZSWIM2Q8NEG5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.77■■□□□ 1.07
ZSWIM2Q8NEG5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZSWIM2Q8NEG5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 UNC93B4-201ENST00000505679 747 ntBASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 AC233263.1-201ENST00000578059 224 ntBASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.75■■□□□ 1.07
ZSWIM2Q8NEG5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms