Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 AC006557.6-201ENST00000623071 864 ntBASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDH20Q8N6Y1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDH20Q8N6Y1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 PRORSD1P-201ENST00000295112 541 ntBASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 AC073648.6-201ENST00000641589 218 ntBASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH20Q8N6Y1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 FEM1AP1-201ENST00000431297 1995 ntBASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 POM121L13P-201ENST00000422362 380 ntBASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 AC092720.2-201ENST00000602388 1665 ntBASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 PTBP1P-201ENST00000554374 1601 ntBASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH20Q8N6Y1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 AC120498.8-201ENST00000614275 531 ntBASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH20Q8N6Y1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 HLA-G-202ENST00000376815 851 ntBASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 HLA-G-203ENST00000376818 1127 ntBASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH20Q8N6Y1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH20Q8N6Y1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms