Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
COMMD1Q8N668 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD1Q8N668 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD1Q8N668 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
COMMD1Q8N668 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
COMMD1Q8N668 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.54■□□□□ 0.24
COMMD1Q8N668 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
COMMD1Q8N668 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
COMMD1Q8N668 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.53■□□□□ 0.24
COMMD1Q8N668 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD1Q8N668 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD1Q8N668 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD1Q8N668 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.53■□□□□ 0.24
COMMD1Q8N668 AC026185.1-201ENST00000445748 174 ntBASIC16.53■□□□□ 0.24
COMMD1Q8N668 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.53■□□□□ 0.24
COMMD1Q8N668 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COMMD1Q8N668 AC231657.2-201ENST00000624556 255 ntBASIC16.53■□□□□ 0.24
COMMD1Q8N668 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD1Q8N668 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.53■□□□□ 0.24
COMMD1Q8N668 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD1Q8N668 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD1Q8N668 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.53■□□□□ 0.24
COMMD1Q8N668 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
COMMD1Q8N668 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
COMMD1Q8N668 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
COMMD1Q8N668 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD1Q8N668 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
COMMD1Q8N668 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD1Q8N668 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD1Q8N668 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
COMMD1Q8N668 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.52■□□□□ 0.24
COMMD1Q8N668 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
COMMD1Q8N668 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.52■□□□□ 0.24
COMMD1Q8N668 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.52■□□□□ 0.24
COMMD1Q8N668 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD1Q8N668 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD1Q8N668 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.52■□□□□ 0.24
COMMD1Q8N668 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD1Q8N668 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.52■□□□□ 0.24
COMMD1Q8N668 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD1Q8N668 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD1Q8N668 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
COMMD1Q8N668 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD1Q8N668 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.52■□□□□ 0.24
COMMD1Q8N668 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD1Q8N668 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.52■□□□□ 0.24
COMMD1Q8N668 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.52■□□□□ 0.24
COMMD1Q8N668 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD1Q8N668 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.52■□□□□ 0.24
COMMD1Q8N668 UBE2DNL-204ENST00000602536 740 ntBASIC16.52■□□□□ 0.24
COMMD1Q8N668 AC073111.5-205ENST00000641717 521 ntBASIC16.52■□□□□ 0.24
COMMD1Q8N668 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD1Q8N668 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD1Q8N668 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD1Q8N668 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD1Q8N668 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD1Q8N668 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD1Q8N668 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD1Q8N668 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD1Q8N668 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.52■□□□□ 0.23
COMMD1Q8N668 AC005082.1-201ENST00000413042 2259 ntBASIC16.52■□□□□ 0.23
COMMD1Q8N668 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD1Q8N668 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD1Q8N668 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.51■□□□□ 0.23
COMMD1Q8N668 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD1Q8N668 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD1Q8N668 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD1Q8N668 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD1Q8N668 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD1Q8N668 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD1Q8N668 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms