Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 GOLGA2P11-201ENST00000562660 1621 ntBASIC26.32■■□□□ 1.8
NGEFQ8N5V2 TMEM179-206ENST00000616017 1645 ntBASIC26.32■■□□□ 1.8
NGEFQ8N5V2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 AC142381.4-202ENST00000563973 229 ntBASIC26.32■■□□□ 1.8
NGEFQ8N5V2 AC073648.6-201ENST00000641589 218 ntBASIC26.32■■□□□ 1.8
NGEFQ8N5V2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NGEFQ8N5V2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 GCSHP5-201ENST00000443090 522 ntBASIC26.31■■□□□ 1.8
NGEFQ8N5V2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NGEFQ8N5V2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC26.3■■□□□ 1.8
NGEFQ8N5V2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NGEFQ8N5V2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
NGEFQ8N5V2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NGEFQ8N5V2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NGEFQ8N5V2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.3■■□□□ 1.8
NGEFQ8N5V2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.3■■□□□ 1.8
NGEFQ8N5V2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.3■■□□□ 1.8
NGEFQ8N5V2 AC008403.3-201ENST00000598924 454 ntBASIC26.3■■□□□ 1.8
NGEFQ8N5V2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NGEFQ8N5V2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.3■■□□□ 1.8
NGEFQ8N5V2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC26.3■■□□□ 1.8
NGEFQ8N5V2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 AL691432.2-201ENST00000607222 2038 ntBASIC26.29■■□□□ 1.8
NGEFQ8N5V2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.29■■□□□ 1.8
NGEFQ8N5V2 AC009237.14-201ENST00000609975 1594 ntBASIC26.29■■□□□ 1.8
NGEFQ8N5V2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 AC060766.5-201ENST00000590539 871 ntBASIC26.28■■□□□ 1.8
NGEFQ8N5V2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NGEFQ8N5V2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
NGEFQ8N5V2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NGEFQ8N5V2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC26.27■■□□□ 1.8
NGEFQ8N5V2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NGEFQ8N5V2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NGEFQ8N5V2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.27■■□□□ 1.8
NGEFQ8N5V2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NGEFQ8N5V2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NGEFQ8N5V2 AC092368.3-202ENST00000574180 1591 ntBASIC26.27■■□□□ 1.8
NGEFQ8N5V2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NGEFQ8N5V2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
NGEFQ8N5V2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NGEFQ8N5V2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NGEFQ8N5V2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms