Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 AC092720.2-201ENST00000602388 1665 ntBASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.59■□□□□ 0.25
C11orf42Q8N5U0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
C11orf42Q8N5U0 AC020907.5-201ENST00000624372 1936 ntBASIC16.58■□□□□ 0.25
C11orf42Q8N5U0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
C11orf42Q8N5U0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
C11orf42Q8N5U0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
C11orf42Q8N5U0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
C11orf42Q8N5U0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
C11orf42Q8N5U0 AL157384.1-201ENST00000445995 2473 ntBASIC16.58■□□□□ 0.25
C11orf42Q8N5U0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf42Q8N5U0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 PTBP1P-201ENST00000554374 1601 ntBASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf42Q8N5U0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms