Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
VPS8Q8N3P4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
VPS8Q8N3P4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC31.37■■■□□ 2.61
VPS8Q8N3P4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
VPS8Q8N3P4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
VPS8Q8N3P4 AC092667.1-201ENST00000434301 2586 ntBASIC31.37■■■□□ 2.61
VPS8Q8N3P4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 PNN-205ENST00000556530 601 ntTSL 2 BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
VPS8Q8N3P4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC31.35■■■□□ 2.61
VPS8Q8N3P4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC31.35■■■□□ 2.61
VPS8Q8N3P4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC31.35■■■□□ 2.61
VPS8Q8N3P4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
VPS8Q8N3P4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC31.35■■■□□ 2.61
VPS8Q8N3P4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC31.35■■■□□ 2.61
VPS8Q8N3P4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC31.35■■■□□ 2.61
VPS8Q8N3P4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC31.35■■■□□ 2.61
VPS8Q8N3P4 MME-217ENST00000616757 1315 ntTSL 5 BASIC31.35■■■□□ 2.61
VPS8Q8N3P4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC31.35■■■□□ 2.61
VPS8Q8N3P4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
VPS8Q8N3P4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC31.34■■■□□ 2.61
VPS8Q8N3P4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC31.34■■■□□ 2.61
VPS8Q8N3P4 AC110285.5-201ENST00000611501 352 ntBASIC31.34■■■□□ 2.61
VPS8Q8N3P4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
VPS8Q8N3P4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
VPS8Q8N3P4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC31.34■■■□□ 2.61
VPS8Q8N3P4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
VPS8Q8N3P4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 AC008550.1-201ENST00000511500 884 ntBASIC31.33■■■□□ 2.61
VPS8Q8N3P4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 TFP1-202ENST00000475455 1573 ntBASIC31.33■■■□□ 2.61
VPS8Q8N3P4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
VPS8Q8N3P4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC31.32■■■□□ 2.61
VPS8Q8N3P4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC31.32■■■□□ 2.61
VPS8Q8N3P4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC31.32■■■□□ 2.61
VPS8Q8N3P4 PRKY-204ENST00000533551 1019 ntBASIC31.32■■■□□ 2.61
VPS8Q8N3P4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC31.32■■■□□ 2.61
VPS8Q8N3P4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.61
VPS8Q8N3P4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC31.32■■■□□ 2.61
VPS8Q8N3P4 AL157384.1-201ENST00000445995 2473 ntBASIC31.32■■■□□ 2.61
VPS8Q8N3P4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 AC018553.1-201ENST00000616682 1458 ntBASIC31.32■■■□□ 2.6
VPS8Q8N3P4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC31.32■■■□□ 2.6
VPS8Q8N3P4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
VPS8Q8N3P4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
VPS8Q8N3P4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC31.31■■■□□ 2.6
VPS8Q8N3P4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC31.31■■■□□ 2.6
VPS8Q8N3P4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC31.31■■■□□ 2.6
VPS8Q8N3P4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
VPS8Q8N3P4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC31.31■■■□□ 2.6
VPS8Q8N3P4 AC012618.2-201ENST00000428058 849 ntBASIC31.31■■■□□ 2.6
VPS8Q8N3P4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
VPS8Q8N3P4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
VPS8Q8N3P4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
VPS8Q8N3P4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms