Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 AC008550.1-201ENST00000511500 884 ntBASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.09■□□□□ 0.97
SCN4BQ8IWT1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
SCN4BQ8IWT1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCN4BQ8IWT1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.08■□□□□ 0.97
SCN4BQ8IWT1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.08■□□□□ 0.97
SCN4BQ8IWT1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SCN4BQ8IWT1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.08■□□□□ 0.97
SCN4BQ8IWT1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCN4BQ8IWT1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.08■□□□□ 0.97
SCN4BQ8IWT1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.08■□□□□ 0.97
SCN4BQ8IWT1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SCN4BQ8IWT1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCN4BQ8IWT1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SCN4BQ8IWT1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.08■□□□□ 0.96
SCN4BQ8IWT1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 AL121829.2-201ENST00000620908 328 ntBASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 SMG8-203ENST00000578922 2178 ntBASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.07■□□□□ 0.96
SCN4BQ8IWT1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.06■□□□□ 0.96
SCN4BQ8IWT1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 AC133681.1-201ENST00000465482 601 ntBASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 AC110285.5-201ENST00000611501 352 ntBASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN4BQ8IWT1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms