Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC71Q8IV32 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 POU5F1P4-201ENST00000413175 1085 ntBASIC18.69■□□□□ 0.58
CCDC71Q8IV32 POU5F1P3-201ENST00000428824 1078 ntBASIC18.69■□□□□ 0.58
CCDC71Q8IV32 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 AC008687.6-201ENST00000596318 630 ntBASIC18.69■□□□□ 0.58
CCDC71Q8IV32 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC71Q8IV32 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 AC092720.2-201ENST00000602388 1665 ntBASIC18.68■□□□□ 0.58
CCDC71Q8IV32 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71Q8IV32 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 AL512625.2-201ENST00000417533 625 ntBASIC18.67■□□□□ 0.58
CCDC71Q8IV32 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 AC092118.2-201ENST00000613495 667 ntBASIC18.67■□□□□ 0.58
CCDC71Q8IV32 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71Q8IV32 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.66■□□□□ 0.58
CCDC71Q8IV32 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 KRT18P29-201ENST00000397031 1267 ntBASIC18.66■□□□□ 0.58
CCDC71Q8IV32 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms