Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PACS2Q86VP3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.01■□□□□ 0.79
PACS2Q86VP3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACS2Q86VP3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACS2Q86VP3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACS2Q86VP3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.01■□□□□ 0.79
PACS2Q86VP3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.01■□□□□ 0.79
PACS2Q86VP3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PACS2Q86VP3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.01■□□□□ 0.79
PACS2Q86VP3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PACS2Q86VP3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PACS2Q86VP3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PACS2Q86VP3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACS2Q86VP3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.01■□□□□ 0.79
PACS2Q86VP3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACS2Q86VP3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.01■□□□□ 0.79
PACS2Q86VP3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
PACS2Q86VP3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.01■□□□□ 0.79
PACS2Q86VP3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PACS2Q86VP3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20■□□□□ 0.79
PACS2Q86VP3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20■□□□□ 0.79
PACS2Q86VP3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20■□□□□ 0.79
PACS2Q86VP3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20■□□□□ 0.79
PACS2Q86VP3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20■□□□□ 0.79
PACS2Q86VP3 AC135050.7-201ENST00000624508 2218 ntBASIC20■□□□□ 0.79
PACS2Q86VP3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
PACS2Q86VP3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PACS2Q86VP3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20■□□□□ 0.79
PACS2Q86VP3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PACS2Q86VP3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PACS2Q86VP3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20■□□□□ 0.79
PACS2Q86VP3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.99■□□□□ 0.79
PACS2Q86VP3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.99■□□□□ 0.79
PACS2Q86VP3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.99■□□□□ 0.79
PACS2Q86VP3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PACS2Q86VP3 MIR572-201ENST00000384983 95 ntBASIC19.99■□□□□ 0.79
PACS2Q86VP3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
PACS2Q86VP3 AL031602.1-201ENST00000633169 911 ntBASIC19.99■□□□□ 0.79
PACS2Q86VP3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PACS2Q86VP3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PACS2Q86VP3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PACS2Q86VP3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PACS2Q86VP3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PACS2Q86VP3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PACS2Q86VP3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 Z82202.1-201ENST00000623446 1880 ntBASIC19.98■□□□□ 0.79
PACS2Q86VP3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PACS2Q86VP3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PACS2Q86VP3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 NOC2LP2-201ENST00000407594 1944 ntBASIC19.98■□□□□ 0.79
PACS2Q86VP3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.98■□□□□ 0.79
PACS2Q86VP3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PACS2Q86VP3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PACS2Q86VP3 AC068880.1-201ENST00000507289 2297 ntBASIC19.97■□□□□ 0.79
PACS2Q86VP3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.97■□□□□ 0.79
PACS2Q86VP3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PACS2Q86VP3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms