Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14□□□□□ -0.17
CSMD3Q7Z407 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.99□□□□□ -0.17
CSMD3Q7Z407 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 SLC25A1P4-201ENST00000567977 778 ntBASIC13.99□□□□□ -0.17
CSMD3Q7Z407 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD3Q7Z407 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 AL445675.2-201ENST00000620291 557 ntBASIC13.98□□□□□ -0.17
CSMD3Q7Z407 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 CR392000.1-201ENST00000624770 1228 ntBASIC13.98□□□□□ -0.17
CSMD3Q7Z407 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 YBX1P2-201ENST00000489612 999 ntBASIC13.98□□□□□ -0.17
CSMD3Q7Z407 AL121906.2-201ENST00000621597 723 ntBASIC13.98□□□□□ -0.17
CSMD3Q7Z407 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD3Q7Z407 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 AC116407.4-201ENST00000623319 1061 ntBASIC13.97□□□□□ -0.17
CSMD3Q7Z407 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 AC091390.4-202ENST00000476426 537 ntBASIC13.97□□□□□ -0.17
CSMD3Q7Z407 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.97□□□□□ -0.17
CSMD3Q7Z407 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 KSR1P1-201ENST00000446298 240 ntBASIC13.96□□□□□ -0.17
CSMD3Q7Z407 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 GOLGA2P6-201ENST00000340929 2049 ntBASIC13.96□□□□□ -0.17
CSMD3Q7Z407 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.96□□□□□ -0.17
CSMD3Q7Z407 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSMD3Q7Z407 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.96□□□□□ -0.18
CSMD3Q7Z407 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms