Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 AF186192.3-201ENST00000583427 947 ntBASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.67■■□□□ 1.7
KDM3BQ7LBC6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM3BQ7LBC6 AC073314.1-201ENST00000568729 2216 ntBASIC25.66■■□□□ 1.7
KDM3BQ7LBC6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
KDM3BQ7LBC6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.66■■□□□ 1.7
KDM3BQ7LBC6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
KDM3BQ7LBC6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.66■■□□□ 1.7
KDM3BQ7LBC6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.66■■□□□ 1.7
KDM3BQ7LBC6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.66■■□□□ 1.7
KDM3BQ7LBC6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM3BQ7LBC6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
KDM3BQ7LBC6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
KDM3BQ7LBC6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM3BQ7LBC6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM3BQ7LBC6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.65■■□□□ 1.7
KDM3BQ7LBC6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM3BQ7LBC6 AC018553.1-201ENST00000616682 1458 ntBASIC25.65■■□□□ 1.7
KDM3BQ7LBC6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
KDM3BQ7LBC6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM3BQ7LBC6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.65■■□□□ 1.7
KDM3BQ7LBC6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM3BQ7LBC6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 BX088651.1-201ENST00000540551 451 ntBASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 MIR4785-201ENST00000585005 73 ntBASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 AC073912.3-201ENST00000624414 853 ntBASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 SMG8-203ENST00000578922 2178 ntBASIC25.64■■□□□ 1.7
KDM3BQ7LBC6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
KDM3BQ7LBC6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
KDM3BQ7LBC6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.69
KDM3BQ7LBC6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
KDM3BQ7LBC6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
KDM3BQ7LBC6 HTR7P1-201ENST00000538670 1336 ntBASIC25.64■■□□□ 1.69
KDM3BQ7LBC6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
KDM3BQ7LBC6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
KDM3BQ7LBC6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.64■■□□□ 1.69
KDM3BQ7LBC6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
KDM3BQ7LBC6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.62■■□□□ 1.69
KDM3BQ7LBC6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
KDM3BQ7LBC6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
KDM3BQ7LBC6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
KDM3BQ7LBC6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
KDM3BQ7LBC6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
KDM3BQ7LBC6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
KDM3BQ7LBC6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.61■■□□□ 1.69
KDM3BQ7LBC6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
KDM3BQ7LBC6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
KDM3BQ7LBC6 TFP1-202ENST00000475455 1573 ntBASIC25.61■■□□□ 1.69
KDM3BQ7LBC6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC25.61■■□□□ 1.69
KDM3BQ7LBC6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms