Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 AC009237.14-201ENST00000609975 1594 ntBASIC22.56■■□□□ 1.2
SHC4Q6S5L8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.56■■□□□ 1.2
SHC4Q6S5L8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 KRT8P20-201ENST00000423953 1409 ntBASIC22.56■■□□□ 1.2
SHC4Q6S5L8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHC4Q6S5L8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 C2orf69P4-201ENST00000565394 541 ntBASIC22.55■■□□□ 1.2
SHC4Q6S5L8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 AC080038.1-201ENST00000611274 1154 ntBASIC22.55■■□□□ 1.2
SHC4Q6S5L8 AL589743.5-201ENST00000616611 1050 ntBASIC22.55■■□□□ 1.2
SHC4Q6S5L8 AL050303.2-201ENST00000619798 666 ntBASIC22.55■■□□□ 1.2
SHC4Q6S5L8 AC073111.5-205ENST00000641717 521 ntBASIC22.55■■□□□ 1.2
SHC4Q6S5L8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHC4Q6S5L8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 CDCA4P2-201ENST00000441182 718 ntBASIC22.54■■□□□ 1.2
SHC4Q6S5L8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHC4Q6S5L8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
SHC4Q6S5L8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHC4Q6S5L8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHC4Q6S5L8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
SHC4Q6S5L8 KRT16P6-202ENST00000425692 1426 ntBASIC22.52■■□□□ 1.2
SHC4Q6S5L8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.52■■□□□ 1.2
SHC4Q6S5L8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.52■■□□□ 1.2
SHC4Q6S5L8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.52■■□□□ 1.2
SHC4Q6S5L8 AC133552.2-202ENST00000575694 574 ntBASIC22.52■■□□□ 1.2
SHC4Q6S5L8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.52■■□□□ 1.2
SHC4Q6S5L8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.52■■□□□ 1.2
SHC4Q6S5L8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.52■■□□□ 1.2
SHC4Q6S5L8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SHC4Q6S5L8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHC4Q6S5L8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.52■■□□□ 1.2
SHC4Q6S5L8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHC4Q6S5L8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
SHC4Q6S5L8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms