Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C11orf88Q6PI97 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 DUX4L2-201ENST00000561772 1275 ntBASIC17.34■□□□□ 0.37
C11orf88Q6PI97 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 AC004408.2-201ENST00000623613 2777 ntBASIC17.34■□□□□ 0.37
C11orf88Q6PI97 DUX4L6-201ENST00000626483 1275 ntBASIC17.34■□□□□ 0.37
C11orf88Q6PI97 DUX4L1-201ENST00000627662 1275 ntBASIC17.34■□□□□ 0.37
C11orf88Q6PI97 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 DUX4L8-201ENST00000629013 1275 ntBASIC17.34■□□□□ 0.37
C11orf88Q6PI97 DUX4L3-201ENST00000630187 1275 ntBASIC17.34■□□□□ 0.37
C11orf88Q6PI97 DUX4L7-201ENST00000630678 1275 ntBASIC17.34■□□□□ 0.37
C11orf88Q6PI97 DUX4L5-201ENST00000630834 1275 ntBASIC17.34■□□□□ 0.37
C11orf88Q6PI97 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
C11orf88Q6PI97 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
C11orf88Q6PI97 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C11orf88Q6PI97 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.33■□□□□ 0.37
C11orf88Q6PI97 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
C11orf88Q6PI97 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C11orf88Q6PI97 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.33■□□□□ 0.37
C11orf88Q6PI97 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.33■□□□□ 0.37
C11orf88Q6PI97 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
C11orf88Q6PI97 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
C11orf88Q6PI97 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 TERF1P2-201ENST00000583350 1212 ntBASIC17.33■□□□□ 0.36
C11orf88Q6PI97 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 AC022517.1-201ENST00000592429 346 ntBASIC17.33■□□□□ 0.36
C11orf88Q6PI97 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C11orf88Q6PI97 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 KRT18P14-201ENST00000534205 1250 ntBASIC17.32■□□□□ 0.36
C11orf88Q6PI97 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 CCDC92B-201ENST00000575506 885 ntBASIC17.32■□□□□ 0.36
C11orf88Q6PI97 MIR6084-201ENST00000622012 110 ntBASIC17.32■□□□□ 0.36
C11orf88Q6PI97 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 AL162377.1-201ENST00000618844 1793 ntBASIC17.32■□□□□ 0.36
C11orf88Q6PI97 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
C11orf88Q6PI97 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 TNXA-203ENST00000507684 2038 ntBASIC17.31■□□□□ 0.36
C11orf88Q6PI97 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms