Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 AC005829.2-201ENST00000571422 1056 ntBASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 AC008687.6-201ENST00000596318 630 ntBASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 AC073648.6-201ENST00000641589 218 ntBASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.81■□□□□ 0.92
RFWD3Q6PCD5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFWD3Q6PCD5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.79■□□□□ 0.92
RFWD3Q6PCD5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 AC233263.1-201ENST00000578059 224 ntBASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFWD3Q6PCD5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms