Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.11■■□□□ 1.61
PRPF40BQ6NWY9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
PRPF40BQ6NWY9 KRT8P9-201ENST00000558927 1449 ntBASIC25.11■■□□□ 1.61
PRPF40BQ6NWY9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.11■■□□□ 1.61
PRPF40BQ6NWY9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PRPF40BQ6NWY9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PRPF40BQ6NWY9 AL049796.1-201ENST00000565336 1766 ntBASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC25.1■■□□□ 1.61
PRPF40BQ6NWY9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 AC005363.2-201ENST00000618631 242 ntBASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC25.09■■□□□ 1.61
PRPF40BQ6NWY9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 AC124283.5-201ENST00000624661 1809 ntBASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 RBM17P1-201ENST00000453646 1190 ntBASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
PRPF40BQ6NWY9 NBPF21P-201ENST00000425093 1451 ntBASIC25.08■■□□□ 1.6
PRPF40BQ6NWY9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 AC079598.2-202ENST00000546624 1451 ntBASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.07■■□□□ 1.6
PRPF40BQ6NWY9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 AC005521.1-201ENST00000393351 872 ntBASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 AC073195.1-201ENST00000607241 877 ntBASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.06■■□□□ 1.6
PRPF40BQ6NWY9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 AP000525.1-201ENST00000608286 694 ntBASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PRPF40BQ6NWY9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms