Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM53AQ6NSI3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.57■□□□□ 0.24
FAM53AQ6NSI3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM53AQ6NSI3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
FAM53AQ6NSI3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 KRT17P1-201ENST00000399211 1546 ntBASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 AC005181.1-201ENST00000604782 1256 ntBASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 AC231657.2-201ENST00000624556 255 ntBASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 PTBP1P-201ENST00000554374 1601 ntBASIC16.56■□□□□ 0.24
FAM53AQ6NSI3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 KRT18P68-201ENST00000392293 1000 ntBASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 CYP2T3P-201ENST00000601990 817 ntBASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 AL137784.2-201ENST00000607332 1000 ntBASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM53AQ6NSI3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 AC010980.2-201ENST00000587099 1412 ntBASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
FAM53AQ6NSI3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 AC007952.6-201ENST00000573168 2673 ntBASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 AC003957.1-201ENST00000625108 2673 ntBASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 AC069236.1-201ENST00000604339 616 ntBASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 AC105020.6-201ENST00000621523 1217 ntBASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FAM53AQ6NSI3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms