Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 CFL2-205ENST00000555765 632 ntTSL 2 BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 AL445675.2-201ENST00000620291 557 ntBASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 AL117328.2-201ENST00000624617 1940 ntBASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 AC121338.2-201ENST00000622535 1744 ntBASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 AC005363.2-201ENST00000618631 242 ntBASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CDC42BPAQ5VT25 AC005229.4-201ENST00000610085 2198 ntBASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 DUX4L26-201ENST00000489078 1255 ntBASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 AC006011.2-201ENST00000621313 1158 ntBASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 FBXW4P1-201ENST00000426721 2239 ntBASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 FEM1AP4-201ENST00000443167 1987 ntBASIC30.46■■■□□ 2.47
CDC42BPAQ5VT25 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CDC42BPAQ5VT25 LTBR-211ENST00000543190 785 ntTSL 3 BASIC30.45■■■□□ 2.47
CDC42BPAQ5VT25 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
CDC42BPAQ5VT25 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
CDC42BPAQ5VT25 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
CDC42BPAQ5VT25 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CDC42BPAQ5VT25 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CDC42BPAQ5VT25 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 KRT18P22-201ENST00000402024 1347 ntBASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 KRT8P17-201ENST00000453110 1448 ntBASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 AC010203.1-204ENST00000548782 407 ntBASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
CDC42BPAQ5VT25 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDC42BPAQ5VT25 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC30.43■■■□□ 2.46
CDC42BPAQ5VT25 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC30.43■■■□□ 2.46
CDC42BPAQ5VT25 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC30.43■■■□□ 2.46
CDC42BPAQ5VT25 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CDC42BPAQ5VT25 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CDC42BPAQ5VT25 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CDC42BPAQ5VT25 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDC42BPAQ5VT25 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDC42BPAQ5VT25 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CDC42BPAQ5VT25 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CDC42BPAQ5VT25 TMA16-209ENST00000513272 803 ntTSL 2 BASIC30.42■■■□□ 2.46
CDC42BPAQ5VT25 AP005242.2-201ENST00000580065 1175 ntBASIC30.42■■■□□ 2.46
CDC42BPAQ5VT25 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC30.42■■■□□ 2.46
CDC42BPAQ5VT25 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
CDC42BPAQ5VT25 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC30.42■■■□□ 2.46
CDC42BPAQ5VT25 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CDC42BPAQ5VT25 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CDC42BPAQ5VT25 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CDC42BPAQ5VT25 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CDC42BPAQ5VT25 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CDC42BPAQ5VT25 AC116351.2-201ENST00000606540 1585 ntBASIC30.41■■■□□ 2.46
CDC42BPAQ5VT25 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CDC42BPAQ5VT25 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CDC42BPAQ5VT25 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDC42BPAQ5VT25 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms