Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.42■■□□□ 1.02
CTC1Q2NKJ3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.42■■□□□ 1.02
CTC1Q2NKJ3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTC1Q2NKJ3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.42■■□□□ 1.02
CTC1Q2NKJ3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.42■■□□□ 1.02
CTC1Q2NKJ3 AL356652.1-201ENST00000615962 565 ntBASIC21.42■■□□□ 1.02
CTC1Q2NKJ3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.42■■□□□ 1.02
CTC1Q2NKJ3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 AC073195.1-201ENST00000607241 877 ntBASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 AC244015.2-201ENST00000616358 1861 ntBASIC21.41■■□□□ 1.02
CTC1Q2NKJ3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.4■■□□□ 1.02
CTC1Q2NKJ3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CTC1Q2NKJ3 AC073508.3-201ENST00000619697 1419 ntBASIC21.39■■□□□ 1.02
CTC1Q2NKJ3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 NUDT16P1-203ENST00000513809 620 ntBASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTC1Q2NKJ3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 REXO1L10P-201ENST00000615707 1290 ntBASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CTC1Q2NKJ3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 UNC93B2-201ENST00000285383 730 ntBASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 AP000525.1-201ENST00000608286 694 ntBASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTC1Q2NKJ3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms