Protein–RNA interactions for Protein: Q04172

SHE9, Sensitive to high expression protein 9, mitochondrial, yeastyeast

Predictions only

Length 456 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE9Q04172 CDC25YLR310C 4770 nt1.52□□□□□ -2.17
SHE9Q04172 BRR2YER172C 6492 nt1.51□□□□□ -2.17
SHE9Q04172 ROM2YLR371W 4071 nt1.51□□□□□ -2.17
SHE9Q04172 YOR329W-AYOR329W-A 210 nt1.51□□□□□ -2.17
SHE9Q04172 PET127YOR017W 2403 nt1.51□□□□□ -2.17
SHE9Q04172 YNL205CYNL205C 423 nt1.5□□□□□ -2.17
SHE9Q04172 YLR232WYLR232W 348 nt1.49□□□□□ -2.17
SHE9Q04172 FYV8YGR196C 2454 nt1.48□□□□□ -2.17
SHE9Q04172 PIK1YNL267W 3201 nt1.47□□□□□ -2.17
SHE9Q04172 SEC8YPR055W 3198 nt1.47□□□□□ -2.17
SHE9Q04172 snR85snR85 171 nt1.47□□□□□ -2.17
SHE9Q04172 RAD9YDR217C 3930 nt1.47□□□□□ -2.17
SHE9Q04172 HKR1YDR420W 5409 nt1.46□□□□□ -2.18
SHE9Q04172 CLU1YMR012W 3834 nt1.45□□□□□ -2.18
SHE9Q04172 QCR9YGR183C 201 nt1.45□□□□□ -2.18
SHE9Q04172 YNL067W-BYNL067W-B 141 nt1.45□□□□□ -2.18
SHE9Q04172 CAT8YMR280C 4302 nt1.44□□□□□ -2.18
SHE9Q04172 PRP16YKR086W 3216 nt1.44□□□□□ -2.18
SHE9Q04172 YDR544CYDR544C 429 nt1.43□□□□□ -2.18
SHE9Q04172 KAP120YPL125W 3099 nt1.42□□□□□ -2.18
SHE9Q04172 OST4YDL232W 111 nt1.41□□□□□ -2.18
SHE9Q04172 tM(CAU)Q2tM(CAU)Q2 78 nt1.41□□□□□ -2.18
SHE9Q04172 YHR131W-AYHR131W-A 246 nt1.41□□□□□ -2.18
SHE9Q04172 YLR399W-AYLR399W-A 105 nt1.41□□□□□ -2.18
SHE9Q04172 YPR160W-AYPR160W-A 81 nt1.41□□□□□ -2.18
SHE9Q04172 snR39BsnR39B 96 nt1.41□□□□□ -2.18
SHE9Q04172 MSH3YCR092C 3057 nt1.41□□□□□ -2.18
SHE9Q04172 tN(GUU)QtN(GUU)Q 71 nt1.38□□□□□ -2.19
SHE9Q04172 YCR095W-AYCR095W-A 159 nt1.37□□□□□ -2.19
SHE9Q04172 YIL071W-AYIL071W-A 477 nt1.37□□□□□ -2.19
SHE9Q04172 BEM3YPL115C 3387 nt1.36□□□□□ -2.19
SHE9Q04172 SOM1YEL059C-A 225 nt1.36□□□□□ -2.19
SHE9Q04172 YBR099CYBR099C 384 nt1.36□□□□□ -2.19
SHE9Q04172 SPT7YBR081C 3999 nt1.34□□□□□ -2.19
SHE9Q04172 YNL284C-BYNL284C-B 5268 nt1.32□□□□□ -2.2
SHE9Q04172 COG6YNL041C 2520 nt1.32□□□□□ -2.2
SHE9Q04172 YDL073WYDL073W 2955 nt1.32□□□□□ -2.2
SHE9Q04172 YDR210WYDR210W 228 nt1.29□□□□□ -2.2
SHE9Q04172 YSP1YHR155W 3687 nt1.28□□□□□ -2.2
SHE9Q04172 LAA1YJL207C 6045 nt1.28□□□□□ -2.2
SHE9Q04172 YJL127W-AYJL127W-A 117 nt1.28□□□□□ -2.2
SHE9Q04172 UBP3YER151C 2739 nt1.28□□□□□ -2.2
SHE9Q04172 YGR130CYGR130C 2451 nt1.25□□□□□ -2.21
SHE9Q04172 SEC1YDR164C 2175 nt1.24□□□□□ -2.21
SHE9Q04172 ANS1YHR126C 480 nt1.24□□□□□ -2.21
SHE9Q04172 PMP2YEL017C-A 132 nt1.23□□□□□ -2.21
SHE9Q04172 BUD3YCL014W 4911 nt1.23□□□□□ -2.21
SHE9Q04172 tH(GUG)E1tH(GUG)E1 72 nt1.22□□□□□ -2.21
SHE9Q04172 tH(GUG)E2tH(GUG)E2 72 nt1.22□□□□□ -2.21
SHE9Q04172 tH(GUG)G1tH(GUG)G1 72 nt1.22□□□□□ -2.21
SHE9Q04172 tH(GUG)G2tH(GUG)G2 72 nt1.22□□□□□ -2.21
SHE9Q04172 tH(GUG)HtH(GUG)H 72 nt1.22□□□□□ -2.21
SHE9Q04172 tH(GUG)KtH(GUG)K 72 nt1.22□□□□□ -2.21
SHE9Q04172 tH(GUG)MtH(GUG)M 72 nt1.22□□□□□ -2.21
SHE9Q04172 YGR146C-AYGR146C-A 162 nt1.22□□□□□ -2.21
SHE9Q04172 YBR072C-AYBR072C-A 162 nt1.21□□□□□ -2.22
SHE9Q04172 RPM2YML091C 3609 nt1.2□□□□□ -2.22
SHE9Q04172 STF2YGR008C 255 nt1.19□□□□□ -2.22
SHE9Q04172 RKR1YMR247C 4689 nt1.19□□□□□ -2.22
SHE9Q04172 IML1YJR138W 4755 nt1.18□□□□□ -2.22
SHE9Q04172 GLG1YKR058W 1851 nt1.18□□□□□ -2.22
SHE9Q04172 NST1YNL091W 3723 nt1.17□□□□□ -2.22
SHE9Q04172 tV(UAC)BtV(UAC)B 74 nt1.16□□□□□ -2.22
SHE9Q04172 tV(UAC)DtV(UAC)D 74 nt1.16□□□□□ -2.22
SHE9Q04172 YNL103W-AYNL103W-A 90 nt1.16□□□□□ -2.22
SHE9Q04172 ULP2YIL031W 3105 nt1.15□□□□□ -2.23
SHE9Q04172 YJR029WYJR029W 5268 nt1.14□□□□□ -2.23
SHE9Q04172 YPR137C-BYPR137C-B 5268 nt1.14□□□□□ -2.23
SHE9Q04172 SCC2YDR180W 4482 nt1.14□□□□□ -2.23
SHE9Q04172 BIR1YJR089W 2865 nt1.12□□□□□ -2.23
SHE9Q04172 VAM6YDL077C 3150 nt1.11□□□□□ -2.23
SHE9Q04172 YLL006W-AYLL006W-A 177 nt1.1□□□□□ -2.23
SHE9Q04172 TFB5YDR079C-A 219 nt1.09□□□□□ -2.23
SHE9Q04172 BEM2YER155C 6504 nt1.09□□□□□ -2.24
SHE9Q04172 NNF2YGR089W 2811 nt1.08□□□□□ -2.24
SHE9Q04172 snR61snR61 90 nt1.08□□□□□ -2.24
SHE9Q04172 EMT1tM(CAU)D 73 nt1.07□□□□□ -2.24
SHE9Q04172 EMT5tM(CAU)J1 73 nt1.07□□□□□ -2.24
SHE9Q04172 EMT3tM(CAU)J2 73 nt1.07□□□□□ -2.24
SHE9Q04172 EMT4tM(CAU)M 73 nt1.07□□□□□ -2.24
SHE9Q04172 EMT2tM(CAU)O2 73 nt1.07□□□□□ -2.24
SHE9Q04172 YNL266WYNL266W 420 nt1.07□□□□□ -2.24
SHE9Q04172 YPR117WYPR117W 7470 nt1.07□□□□□ -2.24
SHE9Q04172 RCO1YMR075W 2055 nt1.06□□□□□ -2.24
SHE9Q04172 SIP4YJL089W 2490 nt1.05□□□□□ -2.24
SHE9Q04172 YBL109WYBL109W 336 nt1.03□□□□□ -2.24
SHE9Q04172 YBR178WYBR178W 375 nt1.03□□□□□ -2.24
SHE9Q04172 CSE1YGL238W 2883 nt1.03□□□□□ -2.24
SHE9Q04172 YDR524C-AYDR524C-A 120 nt1.02□□□□□ -2.25
SHE9Q04172 YOR192C-BYOR192C-B 5313 nt1.01□□□□□ -2.25
SHE9Q04172 DOP1YDR141C 5097 nt1□□□□□ -2.25
SHE9Q04172 YMR326CYMR326C 309 nt1□□□□□ -2.25
SHE9Q04172 HUG1YML058W-A 207 nt0.99□□□□□ -2.25
SHE9Q04172 YGL041C-BYGL041C-B 183 nt0.97□□□□□ -2.25
SHE9Q04172 NIP1YMR309C 2439 nt0.96□□□□□ -2.26
SHE9Q04172 SEC10YLR166C 2616 nt0.95□□□□□ -2.26
SHE9Q04172 PET111YMR257C 2403 nt0.95□□□□□ -2.26
SHE9Q04172 BUL2YML111W 2763 nt0.93□□□□□ -2.26
SHE9Q04172 YBR196C-AYBR196C-A 150 nt0.93□□□□□ -2.26
SHE9Q04172 RPS26AYGL189C 360 nt0.91□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 10.1 ms