Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL1Q00532 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.65■□□□□ 0.74
CDKL1Q00532 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL1Q00532 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL1Q00532 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.65■□□□□ 0.74
CDKL1Q00532 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL1Q00532 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL1Q00532 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKL1Q00532 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.64■□□□□ 0.74
CDKL1Q00532 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.64■□□□□ 0.74
CDKL1Q00532 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CDKL1Q00532 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDKL1Q00532 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDKL1Q00532 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDKL1Q00532 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL1Q00532 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL1Q00532 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL1Q00532 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.64■□□□□ 0.73
CDKL1Q00532 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.64■□□□□ 0.73
CDKL1Q00532 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL1Q00532 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL1Q00532 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL1Q00532 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.64■□□□□ 0.73
CDKL1Q00532 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
CDKL1Q00532 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL1Q00532 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.63■□□□□ 0.73
CDKL1Q00532 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL1Q00532 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL1Q00532 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL1Q00532 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.63■□□□□ 0.73
CDKL1Q00532 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDKL1Q00532 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.63■□□□□ 0.73
CDKL1Q00532 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.63■□□□□ 0.73
CDKL1Q00532 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.63■□□□□ 0.73
CDKL1Q00532 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL1Q00532 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL1Q00532 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL1Q00532 RAP2CP1-201ENST00000605103 478 ntBASIC19.63■□□□□ 0.73
CDKL1Q00532 AL589743.5-201ENST00000616611 1050 ntBASIC19.63■□□□□ 0.73
CDKL1Q00532 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL1Q00532 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDKL1Q00532 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL1Q00532 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.63■□□□□ 0.73
CDKL1Q00532 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.63■□□□□ 0.73
CDKL1Q00532 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL1Q00532 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDKL1Q00532 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.63■□□□□ 0.73
CDKL1Q00532 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL1Q00532 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL1Q00532 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDKL1Q00532 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL1Q00532 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL1Q00532 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL1Q00532 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL1Q00532 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL1Q00532 AC026185.1-201ENST00000445748 174 ntBASIC19.62■□□□□ 0.73
CDKL1Q00532 AC093787.1-201ENST00000450396 207 ntBASIC19.62■□□□□ 0.73
CDKL1Q00532 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.62■□□□□ 0.73
CDKL1Q00532 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.62■□□□□ 0.73
CDKL1Q00532 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL1Q00532 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.62■□□□□ 0.73
CDKL1Q00532 TCF3P1-201ENST00000423021 1937 ntBASIC19.62■□□□□ 0.73
CDKL1Q00532 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL1Q00532 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.62■□□□□ 0.73
CDKL1Q00532 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL1Q00532 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDKL1Q00532 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL1Q00532 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL1Q00532 BX119927.1-201ENST00000636596 1552 ntBASIC19.61■□□□□ 0.73
CDKL1Q00532 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.61■□□□□ 0.73
CDKL1Q00532 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CDKL1Q00532 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.61■□□□□ 0.73
CDKL1Q00532 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL1Q00532 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL1Q00532 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL1Q00532 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
CDKL1Q00532 AC098818.2-201ENST00000564925 2320 ntBASIC19.61■□□□□ 0.73
CDKL1Q00532 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL1Q00532 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDKL1Q00532 AL355472.2-201ENST00000422958 438 ntBASIC19.61■□□□□ 0.73
CDKL1Q00532 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.61■□□□□ 0.73
CDKL1Q00532 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.61■□□□□ 0.73
CDKL1Q00532 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CDKL1Q00532 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.61■□□□□ 0.73
CDKL1Q00532 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.61■□□□□ 0.73
CDKL1Q00532 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL1Q00532 PTBP1P-201ENST00000554374 1601 ntBASIC19.61■□□□□ 0.73
CDKL1Q00532 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.61■□□□□ 0.73
CDKL1Q00532 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL1Q00532 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDKL1Q00532 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL1Q00532 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL1Q00532 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL1Q00532 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL1Q00532 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL1Q00532 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CDKL1Q00532 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKL1Q00532 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL1Q00532 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDKL1Q00532 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms