Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAE1P78406 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.98■□□□□ 0.63
RAE1P78406 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.98■□□□□ 0.63
RAE1P78406 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RAE1P78406 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 KRT16P6-202ENST00000425692 1426 ntBASIC18.98■□□□□ 0.63
RAE1P78406 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAE1P78406 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAE1P78406 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.97■□□□□ 0.63
RAE1P78406 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAE1P78406 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.97■□□□□ 0.63
RAE1P78406 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RAE1P78406 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.97■□□□□ 0.63
RAE1P78406 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAE1P78406 BX276092.2-201ENST00000417668 665 ntBASIC18.97■□□□□ 0.63
RAE1P78406 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAE1P78406 AC023632.3-201ENST00000521633 145 ntBASIC18.97■□□□□ 0.63
RAE1P78406 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.97■□□□□ 0.63
RAE1P78406 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.97■□□□□ 0.63
RAE1P78406 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAE1P78406 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RAE1P78406 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAE1P78406 AC009237.14-201ENST00000609975 1594 ntBASIC18.97■□□□□ 0.63
RAE1P78406 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.97■□□□□ 0.63
RAE1P78406 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAE1P78406 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAE1P78406 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAE1P78406 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAE1P78406 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.96■□□□□ 0.63
RAE1P78406 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.96■□□□□ 0.63
RAE1P78406 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAE1P78406 TREX1-205ENST00000625293 1783 ntBASIC18.96■□□□□ 0.63
RAE1P78406 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RAE1P78406 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.96■□□□□ 0.63
RAE1P78406 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAE1P78406 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAE1P78406 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAE1P78406 GPX1P1-201ENST00000388829 606 ntBASIC18.96■□□□□ 0.63
RAE1P78406 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.96■□□□□ 0.63
RAE1P78406 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.96■□□□□ 0.63
RAE1P78406 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RAE1P78406 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAE1P78406 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAE1P78406 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
RAE1P78406 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
RAE1P78406 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAE1P78406 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAE1P78406 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.96■□□□□ 0.63
RAE1P78406 AC007952.6-201ENST00000573168 2673 ntBASIC18.96■□□□□ 0.63
RAE1P78406 AC003957.1-201ENST00000625108 2673 ntBASIC18.96■□□□□ 0.63
RAE1P78406 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAE1P78406 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAE1P78406 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAE1P78406 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RAE1P78406 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.95■□□□□ 0.62
RAE1P78406 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAE1P78406 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAE1P78406 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAE1P78406 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAE1P78406 HLA-G-202ENST00000376815 851 ntBASIC18.95■□□□□ 0.62
RAE1P78406 HLA-G-203ENST00000376818 1127 ntBASIC18.95■□□□□ 0.62
RAE1P78406 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.95■□□□□ 0.62
RAE1P78406 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.95■□□□□ 0.62
RAE1P78406 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAE1P78406 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAE1P78406 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RAE1P78406 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RAE1P78406 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.95■□□□□ 0.62
RAE1P78406 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.95■□□□□ 0.62
RAE1P78406 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.95■□□□□ 0.62
RAE1P78406 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAE1P78406 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RAE1P78406 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RAE1P78406 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.94■□□□□ 0.62
RAE1P78406 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAE1P78406 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAE1P78406 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.94■□□□□ 0.62
RAE1P78406 AC083906.2-201ENST00000511578 360 ntBASIC18.94■□□□□ 0.62
RAE1P78406 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RAE1P78406 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAE1P78406 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAE1P78406 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAE1P78406 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAE1P78406 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.94■□□□□ 0.62
RAE1P78406 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAE1P78406 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAE1P78406 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAE1P78406 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms