Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
USP46P62068 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
USP46P62068 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.04■□□□□ 0.96
USP46P62068 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.04■□□□□ 0.96
USP46P62068 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.04■□□□□ 0.96
USP46P62068 AC124016.1-201ENST00000609552 612 ntBASIC21.04■□□□□ 0.96
USP46P62068 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.04■□□□□ 0.96
USP46P62068 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.04■□□□□ 0.96
USP46P62068 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP46P62068 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.04■□□□□ 0.96
USP46P62068 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP46P62068 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP46P62068 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP46P62068 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP46P62068 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP46P62068 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP46P62068 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP46P62068 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.03■□□□□ 0.96
USP46P62068 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
USP46P62068 AC008550.1-201ENST00000511500 884 ntBASIC21.03■□□□□ 0.96
USP46P62068 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
USP46P62068 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP46P62068 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP46P62068 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP46P62068 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP46P62068 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
USP46P62068 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP46P62068 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.02■□□□□ 0.96
USP46P62068 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.02■□□□□ 0.96
USP46P62068 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.02■□□□□ 0.96
USP46P62068 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP46P62068 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP46P62068 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP46P62068 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP46P62068 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.02■□□□□ 0.96
USP46P62068 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.02■□□□□ 0.96
USP46P62068 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
USP46P62068 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP46P62068 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP46P62068 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP46P62068 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.01■□□□□ 0.95
USP46P62068 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP46P62068 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP46P62068 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.01■□□□□ 0.95
USP46P62068 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.01■□□□□ 0.95
USP46P62068 RPS2P4-201ENST00000476944 856 ntBASIC21.01■□□□□ 0.95
USP46P62068 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.01■□□□□ 0.95
USP46P62068 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.01■□□□□ 0.95
USP46P62068 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.01■□□□□ 0.95
USP46P62068 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.01■□□□□ 0.95
USP46P62068 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.01■□□□□ 0.95
USP46P62068 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
USP46P62068 AL031963.3-201ENST00000606441 850 ntBASIC21.01■□□□□ 0.95
USP46P62068 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
USP46P62068 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP46P62068 AC092720.2-201ENST00000602388 1665 ntBASIC21.01■□□□□ 0.95
USP46P62068 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP46P62068 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.01■□□□□ 0.95
USP46P62068 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.01■□□□□ 0.95
USP46P62068 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP46P62068 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
USP46P62068 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
USP46P62068 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
USP46P62068 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP46P62068 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
USP46P62068 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21■□□□□ 0.95
USP46P62068 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
USP46P62068 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP46P62068 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP46P62068 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
USP46P62068 AC239809.2-201ENST00000415381 517 ntBASIC21■□□□□ 0.95
USP46P62068 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21■□□□□ 0.95
USP46P62068 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP46P62068 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21■□□□□ 0.95
USP46P62068 KRT8P20-201ENST00000423953 1409 ntBASIC21■□□□□ 0.95
USP46P62068 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP46P62068 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
USP46P62068 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
USP46P62068 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP46P62068 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP46P62068 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP46P62068 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
USP46P62068 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.99■□□□□ 0.95
USP46P62068 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP46P62068 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP46P62068 KRT8P17-201ENST00000453110 1448 ntBASIC20.99■□□□□ 0.95
USP46P62068 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP46P62068 KRASP1-201ENST00000407852 552 ntBASIC20.99■□□□□ 0.95
USP46P62068 AL596275.1-201ENST00000423464 877 ntBASIC20.99■□□□□ 0.95
USP46P62068 AC133681.1-201ENST00000465482 601 ntBASIC20.99■□□□□ 0.95
USP46P62068 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
USP46P62068 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.99■□□□□ 0.95
USP46P62068 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms