Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC243732.1-201ENST00000612648 864 ntBASIC16.21■□□□□ 0.19
SPCS3P61009 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPCS3P61009 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.21■□□□□ 0.19
SPCS3P61009 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SPCS3P61009 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPCS3P61009 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SPCS3P61009 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SPCS3P61009 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
SPCS3P61009 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SPCS3P61009 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SPCS3P61009 AC125437.2-201ENST00000625180 2167 ntBASIC16.2■□□□□ 0.18
SPCS3P61009 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS3P61009 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.2■□□□□ 0.18
SPCS3P61009 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS3P61009 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS3P61009 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.2■□□□□ 0.18
SPCS3P61009 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.2■□□□□ 0.18
SPCS3P61009 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS3P61009 AC104187.1-201ENST00000607510 612 ntBASIC16.2■□□□□ 0.18
SPCS3P61009 LINC02228-203ENST00000641970 1355 ntBASIC16.2■□□□□ 0.18
SPCS3P61009 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS3P61009 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS3P61009 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SPCS3P61009 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.2■□□□□ 0.18
SPCS3P61009 AC116562.4-201ENST00000641316 2276 ntBASIC16.2■□□□□ 0.18
SPCS3P61009 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS3P61009 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SPCS3P61009 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SPCS3P61009 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS3P61009 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SPCS3P61009 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS3P61009 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS3P61009 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS3P61009 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS3P61009 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS3P61009 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS3P61009 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.19■□□□□ 0.18
SPCS3P61009 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.19■□□□□ 0.18
SPCS3P61009 AC027612.3-201ENST00000413684 1047 ntBASIC16.19■□□□□ 0.18
SPCS3P61009 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.19■□□□□ 0.18
SPCS3P61009 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.19■□□□□ 0.18
SPCS3P61009 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.19■□□□□ 0.18
SPCS3P61009 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS3P61009 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SPCS3P61009 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS3P61009 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.19■□□□□ 0.18
SPCS3P61009 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS3P61009 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPCS3P61009 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SPCS3P61009 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.18■□□□□ 0.18
SPCS3P61009 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS3P61009 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.18■□□□□ 0.18
SPCS3P61009 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SPCS3P61009 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SPCS3P61009 BX323043.1-201ENST00000641006 1765 ntBASIC16.18■□□□□ 0.18
SPCS3P61009 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS3P61009 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SPCS3P61009 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.18■□□□□ 0.18
SPCS3P61009 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS3P61009 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS3P61009 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SPCS3P61009 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS3P61009 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS3P61009 AC091799.1-201ENST00000422823 811 ntBASIC16.18■□□□□ 0.18
SPCS3P61009 AC105265.2-201ENST00000467189 838 ntBASIC16.18■□□□□ 0.18
SPCS3P61009 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.18■□□□□ 0.18
SPCS3P61009 AC142381.2-201ENST00000566120 298 ntBASIC16.18■□□□□ 0.18
SPCS3P61009 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS3P61009 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.18■□□□□ 0.18
SPCS3P61009 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS3P61009 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS3P61009 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS3P61009 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.18■□□□□ 0.18
SPCS3P61009 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.18■□□□□ 0.18
SPCS3P61009 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.18■□□□□ 0.18
SPCS3P61009 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SPCS3P61009 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS3P61009 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.18■□□□□ 0.18
SPCS3P61009 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPCS3P61009 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 BX119927.1-201ENST00000636596 1552 ntBASIC16.17■□□□□ 0.18
SPCS3P61009 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.17■□□□□ 0.18
SPCS3P61009 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.17■□□□□ 0.18
SPCS3P61009 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.17■□□□□ 0.18
SPCS3P61009 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPCS3P61009 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SPCS3P61009 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.17■□□□□ 0.18
SPCS3P61009 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.17■□□□□ 0.18
SPCS3P61009 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms