Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.13■□□□□ 0.33
ACTBP60709 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ACTBP60709 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTBP60709 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTBP60709 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTBP60709 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTBP60709 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTBP60709 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ACTBP60709 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.13■□□□□ 0.33
ACTBP60709 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ACTBP60709 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTBP60709 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ACTBP60709 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ACTBP60709 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTBP60709 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTBP60709 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTBP60709 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTBP60709 TREX1-205ENST00000625293 1783 ntBASIC17.12■□□□□ 0.33
ACTBP60709 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTBP60709 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTBP60709 AC008175.2-201ENST00000612840 297 ntBASIC17.12■□□□□ 0.33
ACTBP60709 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTBP60709 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTBP60709 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ACTBP60709 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTBP60709 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTBP60709 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ACTBP60709 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTBP60709 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTBP60709 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTBP60709 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.11■□□□□ 0.33
ACTBP60709 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ACTBP60709 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTBP60709 AC020763.4-201ENST00000623414 4170 ntBASIC17.11■□□□□ 0.33
ACTBP60709 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ACTBP60709 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTBP60709 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTBP60709 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTBP60709 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.11■□□□□ 0.33
ACTBP60709 POU5F1P4-201ENST00000413175 1085 ntBASIC17.11■□□□□ 0.33
ACTBP60709 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.11■□□□□ 0.33
ACTBP60709 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.11■□□□□ 0.33
ACTBP60709 AC245052.3-201ENST00000450182 901 ntBASIC17.11■□□□□ 0.33
ACTBP60709 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.11■□□□□ 0.33
ACTBP60709 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTBP60709 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.11■□□□□ 0.33
ACTBP60709 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTBP60709 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
ACTBP60709 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTBP60709 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTBP60709 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTBP60709 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTBP60709 BX119927.1-201ENST00000636596 1552 ntBASIC17.11■□□□□ 0.33
ACTBP60709 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTBP60709 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTBP60709 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ACTBP60709 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTBP60709 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTBP60709 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.1■□□□□ 0.33
ACTBP60709 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ACTBP60709 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ACTBP60709 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ACTBP60709 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
ACTBP60709 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACTBP60709 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.1■□□□□ 0.33
ACTBP60709 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACTBP60709 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.1■□□□□ 0.33
ACTBP60709 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.1■□□□□ 0.33
ACTBP60709 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.1■□□□□ 0.33
ACTBP60709 MIR6084-201ENST00000622012 110 ntBASIC17.1■□□□□ 0.33
ACTBP60709 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTBP60709 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTBP60709 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.1■□□□□ 0.33
ACTBP60709 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACTBP60709 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.1■□□□□ 0.33
ACTBP60709 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTBP60709 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTBP60709 DPP3P2-201ENST00000416030 1696 ntBASIC17.1■□□□□ 0.33
ACTBP60709 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTBP60709 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ACTBP60709 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.09■□□□□ 0.33
ACTBP60709 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ACTBP60709 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTBP60709 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTBP60709 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ACTBP60709 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms