Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN2P57739 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN2P57739 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN2P57739 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN2P57739 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN2P57739 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN2P57739 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN2P57739 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN2P57739 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN2P57739 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLDN2P57739 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN2P57739 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLDN2P57739 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLDN2P57739 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CLDN2P57739 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.77■□□□□ 0.75
CLDN2P57739 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CLDN2P57739 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLDN2P57739 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLDN2P57739 HTR7P1-201ENST00000538670 1336 ntBASIC19.76■□□□□ 0.75
CLDN2P57739 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN2P57739 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN2P57739 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN2P57739 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN2P57739 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLDN2P57739 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDN2P57739 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN2P57739 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDN2P57739 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDN2P57739 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.76■□□□□ 0.75
CLDN2P57739 AC073912.3-201ENST00000624414 853 ntBASIC19.76■□□□□ 0.75
CLDN2P57739 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN2P57739 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN2P57739 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN2P57739 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN2P57739 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN2P57739 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN2P57739 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN2P57739 KRT17P2-201ENST00000300992 1314 ntBASIC19.76■□□□□ 0.75
CLDN2P57739 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLDN2P57739 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLDN2P57739 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN2P57739 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLDN2P57739 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN2P57739 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN2P57739 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN2P57739 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN2P57739 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN2P57739 KRT16P5-201ENST00000455284 522 ntBASIC19.75■□□□□ 0.75
CLDN2P57739 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN2P57739 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN2P57739 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN2P57739 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN2P57739 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN2P57739 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN2P57739 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN2P57739 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN2P57739 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 PKD1P6-201ENST00000343738 4769 ntBASIC19.74■□□□□ 0.75
CLDN2P57739 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLDN2P57739 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CLDN2P57739 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CLDN2P57739 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.74■□□□□ 0.75
CLDN2P57739 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN2P57739 ECEL1P3-201ENST00000427961 737 ntBASIC19.74■□□□□ 0.75
CLDN2P57739 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN2P57739 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.74■□□□□ 0.75
CLDN2P57739 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 REXO1L12P-201ENST00000622156 912 ntBASIC19.74■□□□□ 0.75
CLDN2P57739 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLDN2P57739 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN2P57739 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CLDN2P57739 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CLDN2P57739 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CLDN2P57739 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN2P57739 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLDN2P57739 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN2P57739 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN2P57739 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN2P57739 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN2P57739 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN2P57739 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN2P57739 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN2P57739 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLDN2P57739 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN2P57739 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CLDN2P57739 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms