Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CLDN18P56856 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN18P56856 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN18P56856 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN18P56856 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CLDN18P56856 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN18P56856 KRASP1-201ENST00000407852 552 ntBASIC17.87■□□□□ 0.45
CLDN18P56856 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN18P56856 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.87■□□□□ 0.45
CLDN18P56856 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN18P56856 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN18P56856 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN18P56856 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN18P56856 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.87■□□□□ 0.45
CLDN18P56856 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.87■□□□□ 0.45
CLDN18P56856 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN18P56856 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN18P56856 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN18P56856 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN18P56856 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CLDN18P56856 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN18P56856 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN18P56856 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN18P56856 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN18P56856 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN18P56856 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN18P56856 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CLDN18P56856 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CLDN18P56856 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN18P56856 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN18P56856 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN18P56856 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CLDN18P56856 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 AP005212.1-201ENST00000581547 1997 ntBASIC17.86■□□□□ 0.45
CLDN18P56856 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLDN18P56856 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLDN18P56856 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLDN18P56856 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.86■□□□□ 0.45
CLDN18P56856 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.86■□□□□ 0.45
CLDN18P56856 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CLDN18P56856 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN18P56856 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.86■□□□□ 0.45
CLDN18P56856 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.86■□□□□ 0.45
CLDN18P56856 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN18P56856 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 KRT16P6-202ENST00000425692 1426 ntBASIC17.86■□□□□ 0.45
CLDN18P56856 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN18P56856 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
CLDN18P56856 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN18P56856 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CLDN18P56856 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLDN18P56856 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN18P56856 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN18P56856 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.85■□□□□ 0.45
CLDN18P56856 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN18P56856 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN18P56856 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN18P56856 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLDN18P56856 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CLDN18P56856 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLDN18P56856 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN18P56856 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN18P56856 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN18P56856 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN18P56856 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.85■□□□□ 0.45
CLDN18P56856 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN18P56856 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.85■□□□□ 0.45
CLDN18P56856 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN18P56856 AC110285.5-201ENST00000611501 352 ntBASIC17.85■□□□□ 0.45
CLDN18P56856 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN18P56856 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN18P56856 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN18P56856 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN18P56856 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN18P56856 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN18P56856 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN18P56856 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLDN18P56856 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN18P56856 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLDN18P56856 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN18P56856 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms