Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CDH12P55289 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH12P55289 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH12P55289 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CDH12P55289 BX119927.1-201ENST00000636596 1552 ntBASIC18.58■□□□□ 0.56
CDH12P55289 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH12P55289 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH12P55289 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH12P55289 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH12P55289 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CDH12P55289 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CDH12P55289 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH12P55289 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.58■□□□□ 0.56
CDH12P55289 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH12P55289 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH12P55289 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDH12P55289 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH12P55289 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH12P55289 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CDH12P55289 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.57■□□□□ 0.56
CDH12P55289 CDV3P1-201ENST00000471403 739 ntBASIC18.57■□□□□ 0.56
CDH12P55289 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.57■□□□□ 0.56
CDH12P55289 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CDH12P55289 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH12P55289 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.57■□□□□ 0.56
CDH12P55289 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH12P55289 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH12P55289 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH12P55289 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH12P55289 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH12P55289 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH12P55289 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.56■□□□□ 0.56
CDH12P55289 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.56■□□□□ 0.56
CDH12P55289 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH12P55289 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH12P55289 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH12P55289 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH12P55289 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH12P55289 BX323043.1-201ENST00000641006 1765 ntBASIC18.56■□□□□ 0.56
CDH12P55289 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH12P55289 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CDH12P55289 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH12P55289 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH12P55289 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.56■□□□□ 0.56
CDH12P55289 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH12P55289 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDH12P55289 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH12P55289 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
CDH12P55289 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH12P55289 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH12P55289 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH12P55289 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CDH12P55289 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH12P55289 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH12P55289 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH12P55289 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDH12P55289 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
CDH12P55289 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH12P55289 TERF1P5-201ENST00000477545 1207 ntBASIC18.55■□□□□ 0.56
CDH12P55289 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH12P55289 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH12P55289 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.55■□□□□ 0.56
CDH12P55289 FAM21FP-204ENST00000608637 956 ntBASIC18.55■□□□□ 0.56
CDH12P55289 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.55■□□□□ 0.56
CDH12P55289 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH12P55289 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH12P55289 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH12P55289 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH12P55289 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH12P55289 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CDH12P55289 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.54■□□□□ 0.56
CDH12P55289 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH12P55289 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH12P55289 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH12P55289 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms