Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
VCPP55072 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.37■■□□□ 1.01
VCPP55072 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.37■■□□□ 1.01
VCPP55072 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.37■■□□□ 1.01
VCPP55072 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 C2orf69P4-201ENST00000565394 541 ntBASIC21.37■■□□□ 1.01
VCPP55072 SOX15-203ENST00000570788 1093 ntBASIC21.37■■□□□ 1.01
VCPP55072 FAM21FP-204ENST00000608637 956 ntBASIC21.37■■□□□ 1.01
VCPP55072 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
VCPP55072 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
VCPP55072 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.37■■□□□ 1.01
VCPP55072 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
VCPP55072 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
VCPP55072 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.36■■□□□ 1.01
VCPP55072 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
VCPP55072 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 AC011484.1-201ENST00000377652 1995 ntBASIC21.36■■□□□ 1.01
VCPP55072 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.36■■□□□ 1.01
VCPP55072 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.36■■□□□ 1.01
VCPP55072 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.36■■□□□ 1.01
VCPP55072 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
VCPP55072 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VCPP55072 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
VCPP55072 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCPP55072 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCPP55072 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCPP55072 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.35■■□□□ 1.01
VCPP55072 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCPP55072 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
VCPP55072 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
VCPP55072 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
VCPP55072 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VCPP55072 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCPP55072 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
VCPP55072 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.35■■□□□ 1.01
VCPP55072 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
VCPP55072 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.35■■□□□ 1.01
VCPP55072 AL049637.2-201ENST00000641778 930 ntBASIC21.35■■□□□ 1.01
VCPP55072 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCPP55072 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VCPP55072 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.35■■□□□ 1.01
VCPP55072 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VCPP55072 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
VCPP55072 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.35■■□□□ 1.01
VCPP55072 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCPP55072 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
VCPP55072 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
VCPP55072 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VCPP55072 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.34■■□□□ 1.01
VCPP55072 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.34■■□□□ 1.01
VCPP55072 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VCPP55072 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.34■■□□□ 1.01
VCPP55072 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCPP55072 AC007322.3-201ENST00000426526 701 ntBASIC21.34■■□□□ 1.01
VCPP55072 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.34■■□□□ 1.01
VCPP55072 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.34■■□□□ 1.01
VCPP55072 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VCPP55072 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.34■■□□□ 1.01
VCPP55072 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.34■■□□□ 1.01
VCPP55072 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCPP55072 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCPP55072 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.34■■□□□ 1.01
VCPP55072 CD177P1-201ENST00000606252 935 ntBASIC21.34■■□□□ 1.01
VCPP55072 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCPP55072 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCPP55072 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
VCPP55072 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
VCPP55072 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCPP55072 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VCPP55072 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.34■■□□□ 1.01
VCPP55072 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
VCPP55072 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1.01
VCPP55072 AC020907.5-201ENST00000624372 1936 ntBASIC21.33■■□□□ 1.01
VCPP55072 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
VCPP55072 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.33■■□□□ 1.01
VCPP55072 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.33■■□□□ 1.01
VCPP55072 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.33■■□□□ 1.01
VCPP55072 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms