Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AL121829.2-201ENST00000620908 328 ntBASIC14.67□□□□□ -0.06
APOC4P55056 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.67□□□□□ -0.06
APOC4P55056 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOC4P55056 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOC4P55056 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOC4P55056 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
APOC4P55056 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOC4P55056 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOC4P55056 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.67□□□□□ -0.06
APOC4P55056 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.67□□□□□ -0.06
APOC4P55056 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOC4P55056 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOC4P55056 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.67□□□□□ -0.06
APOC4P55056 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOC4P55056 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.66□□□□□ -0.06
APOC4P55056 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.66□□□□□ -0.06
APOC4P55056 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
APOC4P55056 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC14.66□□□□□ -0.06
APOC4P55056 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
APOC4P55056 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.66□□□□□ -0.06
APOC4P55056 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
APOC4P55056 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
APOC4P55056 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.66□□□□□ -0.06
APOC4P55056 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
APOC4P55056 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 KRT8P17-201ENST00000453110 1448 ntBASIC14.66□□□□□ -0.06
APOC4P55056 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
APOC4P55056 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.66□□□□□ -0.06
APOC4P55056 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC4P55056 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.66□□□□□ -0.06
APOC4P55056 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.65□□□□□ -0.06
APOC4P55056 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.65□□□□□ -0.06
APOC4P55056 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
APOC4P55056 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.65□□□□□ -0.06
APOC4P55056 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.65□□□□□ -0.06
APOC4P55056 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 RPS2P4-201ENST00000476944 856 ntBASIC14.65□□□□□ -0.06
APOC4P55056 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC4P55056 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.65□□□□□ -0.06
APOC4P55056 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
APOC4P55056 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.65□□□□□ -0.06
APOC4P55056 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.65□□□□□ -0.06
APOC4P55056 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.65□□□□□ -0.06
APOC4P55056 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.65□□□□□ -0.06
APOC4P55056 AL023875.1-201ENST00000640777 796 ntBASIC14.65□□□□□ -0.06
APOC4P55056 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
APOC4P55056 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
APOC4P55056 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
APOC4P55056 KRT16P6-202ENST00000425692 1426 ntBASIC14.65□□□□□ -0.06
APOC4P55056 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
APOC4P55056 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC4P55056 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC4P55056 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
APOC4P55056 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC4P55056 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.64□□□□□ -0.07
APOC4P55056 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.64□□□□□ -0.07
APOC4P55056 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC4P55056 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC4P55056 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.64□□□□□ -0.07
APOC4P55056 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC4P55056 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC4P55056 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
APOC4P55056 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC4P55056 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC4P55056 KRASP1-201ENST00000407852 552 ntBASIC14.64□□□□□ -0.07
APOC4P55056 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.64□□□□□ -0.07
APOC4P55056 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.64□□□□□ -0.07
APOC4P55056 AC133681.1-201ENST00000465482 601 ntBASIC14.64□□□□□ -0.07
APOC4P55056 AC008550.1-201ENST00000511500 884 ntBASIC14.64□□□□□ -0.07
APOC4P55056 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.64□□□□□ -0.07
APOC4P55056 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
APOC4P55056 AL121603.2-201ENST00000557373 2117 ntBASIC14.64□□□□□ -0.07
APOC4P55056 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOC4P55056 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms