Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EPHA4P54764 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.28■□□□□ 0.68
EPHA4P54764 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.28■□□□□ 0.68
EPHA4P54764 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHA4P54764 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
EPHA4P54764 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHA4P54764 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHA4P54764 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
EPHA4P54764 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EPHA4P54764 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EPHA4P54764 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EPHA4P54764 KRT16P5-201ENST00000455284 522 ntBASIC19.28■□□□□ 0.68
EPHA4P54764 SNORA78-201ENST00000459373 127 ntBASIC19.28■□□□□ 0.68
EPHA4P54764 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.28■□□□□ 0.68
EPHA4P54764 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.28■□□□□ 0.68
EPHA4P54764 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.28■□□□□ 0.68
EPHA4P54764 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
EPHA4P54764 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
EPHA4P54764 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHA4P54764 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.28■□□□□ 0.68
EPHA4P54764 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
EPHA4P54764 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.28■□□□□ 0.68
EPHA4P54764 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.28■□□□□ 0.68
EPHA4P54764 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
EPHA4P54764 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHA4P54764 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHA4P54764 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHA4P54764 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHA4P54764 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.28■□□□□ 0.68
EPHA4P54764 AC005229.4-201ENST00000610085 2198 ntBASIC19.27■□□□□ 0.68
EPHA4P54764 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHA4P54764 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHA4P54764 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.27■□□□□ 0.68
EPHA4P54764 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
EPHA4P54764 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHA4P54764 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.27■□□□□ 0.68
EPHA4P54764 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EPHA4P54764 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHA4P54764 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
EPHA4P54764 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EPHA4P54764 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.27■□□□□ 0.68
EPHA4P54764 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.27■□□□□ 0.68
EPHA4P54764 AL049637.2-201ENST00000641778 930 ntBASIC19.27■□□□□ 0.68
EPHA4P54764 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHA4P54764 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHA4P54764 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.27■□□□□ 0.68
EPHA4P54764 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
EPHA4P54764 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.27■□□□□ 0.67
EPHA4P54764 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.26■□□□□ 0.67
EPHA4P54764 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
EPHA4P54764 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.26■□□□□ 0.67
EPHA4P54764 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHA4P54764 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
EPHA4P54764 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
EPHA4P54764 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHA4P54764 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EPHA4P54764 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.26■□□□□ 0.67
EPHA4P54764 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.26■□□□□ 0.67
EPHA4P54764 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.26■□□□□ 0.67
EPHA4P54764 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.26■□□□□ 0.67
EPHA4P54764 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.26■□□□□ 0.67
EPHA4P54764 AC092720.2-201ENST00000602388 1665 ntBASIC19.26■□□□□ 0.67
EPHA4P54764 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.26■□□□□ 0.67
EPHA4P54764 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHA4P54764 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
EPHA4P54764 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHA4P54764 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EPHA4P54764 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA4P54764 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHA4P54764 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHA4P54764 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHA4P54764 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA4P54764 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA4P54764 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA4P54764 DPP3P2-201ENST00000416030 1696 ntBASIC19.25■□□□□ 0.67
EPHA4P54764 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA4P54764 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA4P54764 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA4P54764 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA4P54764 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
EPHA4P54764 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHA4P54764 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA4P54764 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.25■□□□□ 0.67
EPHA4P54764 AL353807.1-201ENST00000427475 662 ntBASIC19.25■□□□□ 0.67
EPHA4P54764 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.25■□□□□ 0.67
EPHA4P54764 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA4P54764 AC004264.1-201ENST00000608354 794 ntBASIC19.25■□□□□ 0.67
EPHA4P54764 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
EPHA4P54764 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHA4P54764 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
EPHA4P54764 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHA4P54764 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHA4P54764 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA4P54764 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA4P54764 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHA4P54764 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA4P54764 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.24■□□□□ 0.67
EPHA4P54764 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA4P54764 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHA4P54764 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms