Protein–RNA interactions for Protein: P53622

COP1, Coatomer subunit alpha, yeastyeast

Known RBP Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
COP1P53622 YKL100W-AYKL100W-A 90 nt1.3□□□□□ -2.2
COP1P53622 WAR1YML076C 2835 nt1.3□□□□□ -2.2
COP1P53622 CHS6YJL099W 2241 nt1.3□□□□□ -2.2
COP1P53622 NOP9YJL010C 2001 nt1.29□□□□□ -2.2
COP1P53622 EAF1YDR359C 2949 nt1.29□□□□□ -2.2
COP1P53622 YLL020CYLL020C 306 nt1.29□□□□□ -2.2
COP1P53622 NUP188YML103C 4968 nt1.29□□□□□ -2.2
COP1P53622 MSN5YDR335W 3675 nt1.28□□□□□ -2.2
COP1P53622 YBL039C-AYBL039C-A 84 nt1.28□□□□□ -2.2
COP1P53622 APL3YBL037W 3078 nt1.27□□□□□ -2.21
COP1P53622 STB6YKL072W 2301 nt1.27□□□□□ -2.21
COP1P53622 SWI4YER111C 3282 nt1.27□□□□□ -2.21
COP1P53622 YML002WYML002W 2214 nt1.26□□□□□ -2.21
COP1P53622 TAH1YCR060W 336 nt1.26□□□□□ -2.21
COP1P53622 YCS4YLR272C 3531 nt1.26□□□□□ -2.21
COP1P53622 RAD9YDR217C 3930 nt1.24□□□□□ -2.21
COP1P53622 snR190snR190 190 nt1.24□□□□□ -2.21
COP1P53622 YBR200W-AYBR200W-A 165 nt1.24□□□□□ -2.21
COP1P53622 SIP4YJL089W 2490 nt1.23□□□□□ -2.21
COP1P53622 FYV10YIL097W 1551 nt1.23□□□□□ -2.21
COP1P53622 YIL071W-AYIL071W-A 477 nt1.23□□□□□ -2.21
COP1P53622 ASE1YOR058C 2658 nt1.22□□□□□ -2.21
COP1P53622 YCR095W-AYCR095W-A 159 nt1.22□□□□□ -2.21
COP1P53622 RPL26BYGR034W 384 nt1.22□□□□□ -2.21
COP1P53622 QCR9YGR183C 201 nt1.22□□□□□ -2.21
COP1P53622 YNL067W-BYNL067W-B 141 nt1.22□□□□□ -2.21
COP1P53622 OST4YDL232W 111 nt1.21□□□□□ -2.22
COP1P53622 YLR041WYLR041W 321 nt1.21□□□□□ -2.22
COP1P53622 YBR099CYBR099C 384 nt1.21□□□□□ -2.22
COP1P53622 YNL284C-BYNL284C-B 5268 nt1.2□□□□□ -2.22
COP1P53622 snR39BsnR39B 96 nt1.2□□□□□ -2.22
COP1P53622 NUP145YGL092W 3954 nt1.2□□□□□ -2.22
COP1P53622 SPT7YBR081C 3999 nt1.2□□□□□ -2.22
COP1P53622 CDC39YCR093W 6327 nt1.19□□□□□ -2.22
COP1P53622 VAM6YDL077C 3150 nt1.19□□□□□ -2.22
COP1P53622 YDR544CYDR544C 429 nt1.18□□□□□ -2.22
COP1P53622 SOM1YEL059C-A 225 nt1.18□□□□□ -2.22
COP1P53622 SEC3YER008C 4011 nt1.17□□□□□ -2.22
COP1P53622 PMP2YEL017C-A 132 nt1.17□□□□□ -2.22
COP1P53622 STF2YGR008C 255 nt1.17□□□□□ -2.22
COP1P53622 YLR232WYLR232W 348 nt1.17□□□□□ -2.22
COP1P53622 YHR131W-AYHR131W-A 246 nt1.16□□□□□ -2.22
COP1P53622 NST1YNL091W 3723 nt1.15□□□□□ -2.22
COP1P53622 tM(CAU)Q2tM(CAU)Q2 78 nt1.15□□□□□ -2.23
COP1P53622 YNL103W-AYNL103W-A 90 nt1.14□□□□□ -2.23
COP1P53622 YDR524C-AYDR524C-A 120 nt1.13□□□□□ -2.23
COP1P53622 YBL109WYBL109W 336 nt1.13□□□□□ -2.23
COP1P53622 HUG1YML058W-A 207 nt1.12□□□□□ -2.23
COP1P53622 TFB5YDR079C-A 219 nt1.11□□□□□ -2.23
COP1P53622 SCC2YDR180W 4482 nt1.11□□□□□ -2.23
COP1P53622 DOP1YDR141C 5097 nt1.1□□□□□ -2.23
COP1P53622 SEC8YPR055W 3198 nt1.1□□□□□ -2.23
COP1P53622 PRP16YKR086W 3216 nt1.09□□□□□ -2.23
COP1P53622 tN(GUU)QtN(GUU)Q 71 nt1.08□□□□□ -2.24
COP1P53622 YBR178WYBR178W 375 nt1.08□□□□□ -2.24
COP1P53622 BUD3YCL014W 4911 nt1.08□□□□□ -2.24
COP1P53622 YDR210WYDR210W 228 nt1.07□□□□□ -2.24
COP1P53622 KAP120YPL125W 3099 nt1.06□□□□□ -2.24
COP1P53622 COG6YNL041C 2520 nt1.06□□□□□ -2.24
COP1P53622 YJL127W-AYJL127W-A 117 nt1.06□□□□□ -2.24
COP1P53622 YLR399W-AYLR399W-A 105 nt1.06□□□□□ -2.24
COP1P53622 YPR160W-AYPR160W-A 81 nt1.06□□□□□ -2.24
COP1P53622 ROM2YLR371W 4071 nt1.05□□□□□ -2.24
COP1P53622 YJR029WYJR029W 5268 nt1.05□□□□□ -2.24
COP1P53622 YPR137C-BYPR137C-B 5268 nt1.05□□□□□ -2.24
COP1P53622 CLU1YMR012W 3834 nt1.05□□□□□ -2.24
COP1P53622 UBP3YER151C 2739 nt1.04□□□□□ -2.24
COP1P53622 YMR326CYMR326C 309 nt1.04□□□□□ -2.24
COP1P53622 SEC1YDR164C 2175 nt1.03□□□□□ -2.24
COP1P53622 BEM2YER155C 6504 nt1.03□□□□□ -2.24
COP1P53622 BEM3YPL115C 3387 nt1.03□□□□□ -2.24
COP1P53622 snR61snR61 90 nt1.03□□□□□ -2.24
COP1P53622 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
COP1P53622 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
COP1P53622 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
COP1P53622 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
COP1P53622 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
COP1P53622 YDL073WYDL073W 2955 nt1.02□□□□□ -2.25
COP1P53622 RCO1YMR075W 2055 nt1.01□□□□□ -2.25
COP1P53622 YGR146C-AYGR146C-A 162 nt0.99□□□□□ -2.25
COP1P53622 YGL041C-BYGL041C-B 183 nt0.97□□□□□ -2.25
COP1P53622 BIR1YJR089W 2865 nt0.96□□□□□ -2.26
COP1P53622 YSP1YHR155W 3687 nt0.96□□□□□ -2.26
COP1P53622 YHR217CYHR217C 462 nt0.96□□□□□ -2.26
COP1P53622 YBR072C-AYBR072C-A 162 nt0.95□□□□□ -2.26
COP1P53622 RKR1YMR247C 4689 nt0.94□□□□□ -2.26
COP1P53622 YNL266WYNL266W 420 nt0.94□□□□□ -2.26
COP1P53622 MYO1YHR023W 5787 nt0.92□□□□□ -2.26
COP1P53622 NNF2YGR089W 2811 nt0.91□□□□□ -2.26
COP1P53622 GLG1YKR058W 1851 nt0.9□□□□□ -2.26
COP1P53622 PAU24YBR301W 363 nt0.9□□□□□ -2.27
COP1P53622 ULP2YIL031W 3105 nt0.88□□□□□ -2.27
COP1P53622 SBH1YER087C-B 249 nt0.88□□□□□ -2.27
COP1P53622 RPM2YML091C 3609 nt0.87□□□□□ -2.27
COP1P53622 YLL006W-AYLL006W-A 177 nt0.86□□□□□ -2.27
COP1P53622 snR81snR81 201 nt0.84□□□□□ -2.27
COP1P53622 YIL142C-AYIL142C-A 333 nt0.83□□□□□ -2.28
COP1P53622 YPR117WYPR117W 7470 nt0.82□□□□□ -2.28
COP1P53622 YOR192C-BYOR192C-B 5313 nt0.82□□□□□ -2.28
COP1P53622 YBR196C-AYBR196C-A 150 nt0.82□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 33 ms