Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NEK4P51957 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEK4P51957 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.78■■□□□ 1.4
NEK4P51957 AC100791.3-201ENST00000617619 330 ntBASIC23.78■■□□□ 1.4
NEK4P51957 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
NEK4P51957 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEK4P51957 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEK4P51957 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEK4P51957 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEK4P51957 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEK4P51957 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NEK4P51957 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
NEK4P51957 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEK4P51957 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEK4P51957 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.77■■□□□ 1.4
NEK4P51957 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NEK4P51957 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEK4P51957 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEK4P51957 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
NEK4P51957 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEK4P51957 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.77■■□□□ 1.4
NEK4P51957 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEK4P51957 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.77■■□□□ 1.4
NEK4P51957 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.77■■□□□ 1.4
NEK4P51957 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.77■■□□□ 1.4
NEK4P51957 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEK4P51957 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NEK4P51957 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NEK4P51957 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.77■■□□□ 1.4
NEK4P51957 TREX1-205ENST00000625293 1783 ntBASIC23.77■■□□□ 1.4
NEK4P51957 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEK4P51957 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NEK4P51957 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NEK4P51957 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NEK4P51957 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEK4P51957 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEK4P51957 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC23.76■■□□□ 1.39
NEK4P51957 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.76■■□□□ 1.39
NEK4P51957 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
NEK4P51957 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
NEK4P51957 AC026271.2-201ENST00000428091 497 ntBASIC23.76■■□□□ 1.39
NEK4P51957 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.76■■□□□ 1.39
NEK4P51957 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.76■■□□□ 1.39
NEK4P51957 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
NEK4P51957 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.76■■□□□ 1.39
NEK4P51957 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
NEK4P51957 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NEK4P51957 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.76■■□□□ 1.39
NEK4P51957 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEK4P51957 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NEK4P51957 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEK4P51957 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.76■■□□□ 1.39
NEK4P51957 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NEK4P51957 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NEK4P51957 KRT8P17-201ENST00000453110 1448 ntBASIC23.76■■□□□ 1.39
NEK4P51957 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.75■■□□□ 1.39
NEK4P51957 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NEK4P51957 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NEK4P51957 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
NEK4P51957 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.75■■□□□ 1.39
NEK4P51957 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.75■■□□□ 1.39
NEK4P51957 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
NEK4P51957 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
NEK4P51957 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.75■■□□□ 1.39
NEK4P51957 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NEK4P51957 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.75■■□□□ 1.39
NEK4P51957 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NEK4P51957 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NEK4P51957 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NEK4P51957 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK4P51957 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK4P51957 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK4P51957 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK4P51957 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK4P51957 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
NEK4P51957 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK4P51957 AC006015.1-201ENST00000429970 570 ntBASIC23.74■■□□□ 1.39
NEK4P51957 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
NEK4P51957 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.74■■□□□ 1.39
NEK4P51957 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK4P51957 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NEK4P51957 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NEK4P51957 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.74■■□□□ 1.39
NEK4P51957 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
NEK4P51957 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NEK4P51957 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.73■■□□□ 1.39
NEK4P51957 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.73■■□□□ 1.39
NEK4P51957 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NEK4P51957 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
NEK4P51957 KRT18P68-201ENST00000392293 1000 ntBASIC23.73■■□□□ 1.39
NEK4P51957 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.73■■□□□ 1.39
NEK4P51957 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.73■■□□□ 1.39
NEK4P51957 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.73■■□□□ 1.39
NEK4P51957 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.73■■□□□ 1.39
NEK4P51957 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NEK4P51957 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.73■■□□□ 1.39
NEK4P51957 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NEK4P51957 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NEK4P51957 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NEK4P51957 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms