Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDE6CP51160 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE6CP51160 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PDE6CP51160 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.57■■□□□ 1.04
PDE6CP51160 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.57■■□□□ 1.04
PDE6CP51160 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.57■■□□□ 1.04
PDE6CP51160 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.57■■□□□ 1.04
PDE6CP51160 AC083880.1-201ENST00000608266 535 ntBASIC21.57■■□□□ 1.04
PDE6CP51160 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.57■■□□□ 1.04
PDE6CP51160 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
PDE6CP51160 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PDE6CP51160 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE6CP51160 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
PDE6CP51160 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6CP51160 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PDE6CP51160 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE6CP51160 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6CP51160 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PDE6CP51160 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE6CP51160 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE6CP51160 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6CP51160 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE6CP51160 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.56■■□□□ 1.04
PDE6CP51160 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
PDE6CP51160 AC105020.6-201ENST00000621523 1217 ntBASIC21.56■■□□□ 1.04
PDE6CP51160 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6CP51160 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE6CP51160 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6CP51160 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6CP51160 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6CP51160 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6CP51160 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PDE6CP51160 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6CP51160 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
PDE6CP51160 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE6CP51160 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6CP51160 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6CP51160 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6CP51160 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE6CP51160 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
PDE6CP51160 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6CP51160 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PDE6CP51160 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE6CP51160 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PDE6CP51160 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE6CP51160 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6CP51160 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PDE6CP51160 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PDE6CP51160 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.55■■□□□ 1.04
PDE6CP51160 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.55■■□□□ 1.04
PDE6CP51160 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.55■■□□□ 1.04
PDE6CP51160 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE6CP51160 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6CP51160 MIR4651-201ENST00000582622 73 ntBASIC21.55■■□□□ 1.04
PDE6CP51160 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6CP51160 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE6CP51160 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6CP51160 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6CP51160 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE6CP51160 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6CP51160 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6CP51160 RNF165-205ENST00000588679 2904 ntBASIC21.55■■□□□ 1.04
PDE6CP51160 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6CP51160 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6CP51160 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.55■■□□□ 1.04
PDE6CP51160 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6CP51160 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
PDE6CP51160 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.54■■□□□ 1.04
PDE6CP51160 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.54■■□□□ 1.04
PDE6CP51160 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6CP51160 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6CP51160 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.54■■□□□ 1.04
PDE6CP51160 POU5F1P3-201ENST00000428824 1078 ntBASIC21.54■■□□□ 1.04
PDE6CP51160 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
PDE6CP51160 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6CP51160 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.54■■□□□ 1.04
PDE6CP51160 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6CP51160 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PDE6CP51160 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6CP51160 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDE6CP51160 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE6CP51160 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
PDE6CP51160 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE6CP51160 KRT18P68-201ENST00000392293 1000 ntBASIC21.53■■□□□ 1.04
PDE6CP51160 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PDE6CP51160 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.53■■□□□ 1.04
PDE6CP51160 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE6CP51160 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6CP51160 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.53■■□□□ 1.04
PDE6CP51160 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.53■■□□□ 1.04
PDE6CP51160 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.53■■□□□ 1.04
PDE6CP51160 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE6CP51160 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE6CP51160 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6CP51160 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6CP51160 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE6CP51160 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PDE6CP51160 TCF3P1-201ENST00000423021 1937 ntBASIC21.53■■□□□ 1.04
PDE6CP51160 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PDE6CP51160 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms