Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRP9P49458 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
SRP9P49458 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP9P49458 AC004911.1-201ENST00000416316 871 ntBASIC17.68■□□□□ 0.42
SRP9P49458 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.68■□□□□ 0.42
SRP9P49458 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.68■□□□□ 0.42
SRP9P49458 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.68■□□□□ 0.42
SRP9P49458 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.68■□□□□ 0.42
SRP9P49458 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRP9P49458 AC243732.1-201ENST00000612648 864 ntBASIC17.68■□□□□ 0.42
SRP9P49458 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.68■□□□□ 0.42
SRP9P49458 AC010536.3-201ENST00000620306 533 ntBASIC17.68■□□□□ 0.42
SRP9P49458 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SRP9P49458 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP9P49458 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP9P49458 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP9P49458 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP9P49458 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRP9P49458 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.68■□□□□ 0.42
SRP9P49458 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SRP9P49458 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.67■□□□□ 0.42
SRP9P49458 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SRP9P49458 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SRP9P49458 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SRP9P49458 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.67■□□□□ 0.42
SRP9P49458 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.67■□□□□ 0.42
SRP9P49458 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
SRP9P49458 MFSD11-216ENST00000590393 1141 ntBASIC17.67■□□□□ 0.42
SRP9P49458 AC092437.1-201ENST00000624794 1048 ntBASIC17.67■□□□□ 0.42
SRP9P49458 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SRP9P49458 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SRP9P49458 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRP9P49458 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SRP9P49458 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRP9P49458 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRP9P49458 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRP9P49458 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRP9P49458 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRP9P49458 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.66■□□□□ 0.42
SRP9P49458 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRP9P49458 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRP9P49458 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRP9P49458 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SRP9P49458 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SRP9P49458 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.66■□□□□ 0.42
SRP9P49458 TERF1P5-201ENST00000477545 1207 ntBASIC17.66■□□□□ 0.42
SRP9P49458 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.66■□□□□ 0.42
SRP9P49458 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.66■□□□□ 0.42
SRP9P49458 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRP9P49458 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SRP9P49458 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRP9P49458 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.66■□□□□ 0.42
SRP9P49458 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.66■□□□□ 0.42
SRP9P49458 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SRP9P49458 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SRP9P49458 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.66■□□□□ 0.42
SRP9P49458 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRP9P49458 RBM17P2-201ENST00000616397 1405 ntBASIC17.65■□□□□ 0.42
SRP9P49458 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.65■□□□□ 0.42
SRP9P49458 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRP9P49458 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRP9P49458 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRP9P49458 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.65■□□□□ 0.42
SRP9P49458 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.65■□□□□ 0.42
SRP9P49458 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRP9P49458 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.65■□□□□ 0.42
SRP9P49458 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.65■□□□□ 0.42
SRP9P49458 AC013268.1-206ENST00000638368 961 ntBASIC17.65■□□□□ 0.42
SRP9P49458 AC112229.1-201ENST00000639295 961 ntBASIC17.65■□□□□ 0.42
SRP9P49458 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRP9P49458 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRP9P49458 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRP9P49458 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SRP9P49458 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRP9P49458 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRP9P49458 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRP9P49458 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRP9P49458 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRP9P49458 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.64■□□□□ 0.42
SRP9P49458 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SRP9P49458 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.64■□□□□ 0.42
SRP9P49458 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SRP9P49458 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SRP9P49458 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRP9P49458 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms