Protein–RNA interactions for Protein: P48237

CCM1, Mitochondrial group I intron splicing factor CCM1, yeastyeast

Predicted RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CCM1P48237 CDC39YCR093W 6327 nt1.57□□□□□ -2.16
CCM1P48237 TAH1YCR060W 336 nt1.56□□□□□ -2.16
CCM1P48237 snR190snR190 190 nt1.56□□□□□ -2.16
CCM1P48237 PIK1YNL267W 3201 nt1.56□□□□□ -2.16
CCM1P48237 RPL26BYGR034W 384 nt1.55□□□□□ -2.16
CCM1P48237 HUG1YML058W-A 207 nt1.55□□□□□ -2.16
CCM1P48237 YOR329W-AYOR329W-A 210 nt1.54□□□□□ -2.16
CCM1P48237 FYV10YIL097W 1551 nt1.54□□□□□ -2.16
CCM1P48237 CCH1YGR217W 6120 nt1.53□□□□□ -2.16
CCM1P48237 SEC21YNL287W 2808 nt1.53□□□□□ -2.16
CCM1P48237 MSH3YCR092C 3057 nt1.53□□□□□ -2.17
CCM1P48237 STF2YGR008C 255 nt1.52□□□□□ -2.17
CCM1P48237 YGR130CYGR130C 2451 nt1.52□□□□□ -2.17
CCM1P48237 YIL071W-AYIL071W-A 477 nt1.5□□□□□ -2.17
CCM1P48237 OST4YDL232W 111 nt1.49□□□□□ -2.17
CCM1P48237 snR39BsnR39B 96 nt1.48□□□□□ -2.17
CCM1P48237 CDC25YLR310C 4770 nt1.48□□□□□ -2.17
CCM1P48237 MSN5YDR335W 3675 nt1.47□□□□□ -2.17
CCM1P48237 QCR9YGR183C 201 nt1.47□□□□□ -2.17
CCM1P48237 YNL067W-BYNL067W-B 141 nt1.47□□□□□ -2.17
CCM1P48237 ROM2YLR371W 4071 nt1.46□□□□□ -2.18
CCM1P48237 YLR232WYLR232W 348 nt1.45□□□□□ -2.18
CCM1P48237 KAP120YPL125W 3099 nt1.45□□□□□ -2.18
CCM1P48237 YCR095W-AYCR095W-A 159 nt1.44□□□□□ -2.18
CCM1P48237 tH(GUG)E1tH(GUG)E1 72 nt1.44□□□□□ -2.18
CCM1P48237 tH(GUG)E2tH(GUG)E2 72 nt1.44□□□□□ -2.18
CCM1P48237 tH(GUG)G1tH(GUG)G1 72 nt1.44□□□□□ -2.18
CCM1P48237 tH(GUG)G2tH(GUG)G2 72 nt1.44□□□□□ -2.18
CCM1P48237 tH(GUG)HtH(GUG)H 72 nt1.44□□□□□ -2.18
CCM1P48237 tH(GUG)KtH(GUG)K 72 nt1.44□□□□□ -2.18
CCM1P48237 tH(GUG)MtH(GUG)M 72 nt1.44□□□□□ -2.18
CCM1P48237 YBR099CYBR099C 384 nt1.44□□□□□ -2.18
CCM1P48237 RAD9YDR217C 3930 nt1.43□□□□□ -2.18
CCM1P48237 SEC8YPR055W 3198 nt1.42□□□□□ -2.18
CCM1P48237 YDR544CYDR544C 429 nt1.41□□□□□ -2.18
CCM1P48237 SOM1YEL059C-A 225 nt1.41□□□□□ -2.18
CCM1P48237 YHR131W-AYHR131W-A 246 nt1.41□□□□□ -2.18
CCM1P48237 LAA1YJL207C 6045 nt1.4□□□□□ -2.19
CCM1P48237 PRP16YKR086W 3216 nt1.39□□□□□ -2.19
CCM1P48237 CLU1YMR012W 3834 nt1.39□□□□□ -2.19
CCM1P48237 NST1YNL091W 3723 nt1.39□□□□□ -2.19
CCM1P48237 tM(CAU)Q2tM(CAU)Q2 78 nt1.38□□□□□ -2.19
CCM1P48237 YPR160W-AYPR160W-A 81 nt1.38□□□□□ -2.19
CCM1P48237 tN(GUU)QtN(GUU)Q 71 nt1.37□□□□□ -2.19
CCM1P48237 YLR399W-AYLR399W-A 105 nt1.36□□□□□ -2.19
CCM1P48237 IML1YJR138W 4755 nt1.36□□□□□ -2.19
CCM1P48237 YNL284C-BYNL284C-B 5268 nt1.36□□□□□ -2.19
CCM1P48237 COG6YNL041C 2520 nt1.34□□□□□ -2.19
CCM1P48237 YDR210WYDR210W 228 nt1.34□□□□□ -2.19
CCM1P48237 PMP2YEL017C-A 132 nt1.34□□□□□ -2.19
CCM1P48237 tV(UAC)BtV(UAC)B 74 nt1.32□□□□□ -2.2
CCM1P48237 tV(UAC)DtV(UAC)D 74 nt1.32□□□□□ -2.2
CCM1P48237 YNL103W-AYNL103W-A 90 nt1.32□□□□□ -2.2
CCM1P48237 SEC1YDR164C 2175 nt1.3□□□□□ -2.2
CCM1P48237 RPM2YML091C 3609 nt1.28□□□□□ -2.2
CCM1P48237 YJL127W-AYJL127W-A 117 nt1.28□□□□□ -2.2
CCM1P48237 YBL109WYBL109W 336 nt1.28□□□□□ -2.2
CCM1P48237 YDL073WYDL073W 2955 nt1.28□□□□□ -2.2
CCM1P48237 TFB5YDR079C-A 219 nt1.27□□□□□ -2.21
CCM1P48237 YDR524C-AYDR524C-A 120 nt1.27□□□□□ -2.21
CCM1P48237 BEM3YPL115C 3387 nt1.26□□□□□ -2.21
CCM1P48237 SPT7YBR081C 3999 nt1.26□□□□□ -2.21
CCM1P48237 YGR146C-AYGR146C-A 162 nt1.26□□□□□ -2.21
CCM1P48237 VAM6YDL077C 3150 nt1.26□□□□□ -2.21
CCM1P48237 SIP4YJL089W 2490 nt1.25□□□□□ -2.21
CCM1P48237 YSP1YHR155W 3687 nt1.25□□□□□ -2.21
CCM1P48237 BUD3YCL014W 4911 nt1.24□□□□□ -2.21
CCM1P48237 BEM2YER155C 6504 nt1.22□□□□□ -2.21
CCM1P48237 RCO1YMR075W 2055 nt1.22□□□□□ -2.21
CCM1P48237 snR61snR61 90 nt1.22□□□□□ -2.21
CCM1P48237 YBR178WYBR178W 375 nt1.22□□□□□ -2.21
CCM1P48237 UBP3YER151C 2739 nt1.2□□□□□ -2.22
CCM1P48237 DOP1YDR141C 5097 nt1.19□□□□□ -2.22
CCM1P48237 BIR1YJR089W 2865 nt1.19□□□□□ -2.22
CCM1P48237 YMR326CYMR326C 309 nt1.19□□□□□ -2.22
CCM1P48237 YJR029WYJR029W 5268 nt1.18□□□□□ -2.22
CCM1P48237 YPR137C-BYPR137C-B 5268 nt1.18□□□□□ -2.22
CCM1P48237 YBR072C-AYBR072C-A 162 nt1.18□□□□□ -2.22
CCM1P48237 SCC2YDR180W 4482 nt1.17□□□□□ -2.22
CCM1P48237 RKR1YMR247C 4689 nt1.16□□□□□ -2.22
CCM1P48237 ULP2YIL031W 3105 nt1.16□□□□□ -2.22
CCM1P48237 GLG1YKR058W 1851 nt1.16□□□□□ -2.22
CCM1P48237 PAU12YGR294W 363 nt1.15□□□□□ -2.23
CCM1P48237 PAU24YBR301W 363 nt1.15□□□□□ -2.23
CCM1P48237 NNF2YGR089W 2811 nt1.14□□□□□ -2.23
CCM1P48237 EMT1tM(CAU)D 73 nt1.14□□□□□ -2.23
CCM1P48237 EMT5tM(CAU)J1 73 nt1.14□□□□□ -2.23
CCM1P48237 EMT3tM(CAU)J2 73 nt1.14□□□□□ -2.23
CCM1P48237 EMT4tM(CAU)M 73 nt1.14□□□□□ -2.23
CCM1P48237 EMT2tM(CAU)O2 73 nt1.14□□□□□ -2.23
CCM1P48237 YNL266WYNL266W 420 nt1.13□□□□□ -2.23
CCM1P48237 YHR217CYHR217C 462 nt1.11□□□□□ -2.23
CCM1P48237 MYO1YHR023W 5787 nt1.1□□□□□ -2.23
CCM1P48237 YGL041C-BYGL041C-B 183 nt1.1□□□□□ -2.23
CCM1P48237 YPR117WYPR117W 7470 nt1.07□□□□□ -2.24
CCM1P48237 SBH1YER087C-B 249 nt1.06□□□□□ -2.24
CCM1P48237 YLL006W-AYLL006W-A 177 nt1.06□□□□□ -2.24
CCM1P48237 tF(GAA)BtF(GAA)B 73 nt1.04□□□□□ -2.24
CCM1P48237 tF(GAA)FtF(GAA)F 73 nt1.04□□□□□ -2.24
CCM1P48237 tF(GAA)GtF(GAA)G 73 nt1.04□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms