Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20■□□□□ 0.79
CXCL12P48061 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CXCL12P48061 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
CXCL12P48061 AP006587.1-201ENST00000534129 1502 ntBASIC19.99■□□□□ 0.79
CXCL12P48061 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCL12P48061 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.99■□□□□ 0.79
CXCL12P48061 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCL12P48061 CRYGFP-201ENST00000418459 633 ntBASIC19.99■□□□□ 0.79
CXCL12P48061 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCL12P48061 B3GAT3P1-201ENST00000471720 806 ntBASIC19.99■□□□□ 0.79
CXCL12P48061 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.99■□□□□ 0.79
CXCL12P48061 C1QL1P1-201ENST00000568105 661 ntBASIC19.99■□□□□ 0.79
CXCL12P48061 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.99■□□□□ 0.79
CXCL12P48061 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.99■□□□□ 0.79
CXCL12P48061 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.99■□□□□ 0.79
CXCL12P48061 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCL12P48061 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CXCL12P48061 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.99■□□□□ 0.79
CXCL12P48061 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CXCL12P48061 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CXCL12P48061 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CXCL12P48061 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.98■□□□□ 0.79
CXCL12P48061 AC022616.7-201ENST00000525383 220 ntBASIC19.98■□□□□ 0.79
CXCL12P48061 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.98■□□□□ 0.79
CXCL12P48061 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.98■□□□□ 0.79
CXCL12P48061 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CXCL12P48061 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CXCL12P48061 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.98■□□□□ 0.79
CXCL12P48061 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CXCL12P48061 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL12P48061 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL12P48061 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL12P48061 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CXCL12P48061 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL12P48061 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL12P48061 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.97■□□□□ 0.79
CXCL12P48061 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CXCL12P48061 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.97■□□□□ 0.79
CXCL12P48061 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.97■□□□□ 0.79
CXCL12P48061 AC063952.2-201ENST00000498792 1227 ntBASIC19.97■□□□□ 0.79
CXCL12P48061 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CXCL12P48061 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.97■□□□□ 0.79
CXCL12P48061 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.97■□□□□ 0.79
CXCL12P48061 AL358472.4-201ENST00000633140 710 ntBASIC19.97■□□□□ 0.79
CXCL12P48061 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL12P48061 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL12P48061 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL12P48061 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL12P48061 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.97■□□□□ 0.79
CXCL12P48061 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL12P48061 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.97■□□□□ 0.79
CXCL12P48061 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL12P48061 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.97■□□□□ 0.79
CXCL12P48061 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.97■□□□□ 0.79
CXCL12P48061 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL12P48061 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL12P48061 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL12P48061 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL12P48061 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL12P48061 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CXCL12P48061 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.96■□□□□ 0.79
CXCL12P48061 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CXCL12P48061 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL12P48061 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL12P48061 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.96■□□□□ 0.79
CXCL12P48061 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL12P48061 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL12P48061 AC011506.1-201ENST00000474329 610 ntBASIC19.96■□□□□ 0.79
CXCL12P48061 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.96■□□□□ 0.79
CXCL12P48061 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.96■□□□□ 0.79
CXCL12P48061 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.96■□□□□ 0.79
CXCL12P48061 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.96■□□□□ 0.79
CXCL12P48061 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CXCL12P48061 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.96■□□□□ 0.79
CXCL12P48061 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CXCL12P48061 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CXCL12P48061 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CXCL12P48061 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL12P48061 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL12P48061 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CXCL12P48061 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL12P48061 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL12P48061 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL12P48061 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CXCL12P48061 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL12P48061 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CXCL12P48061 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.95■□□□□ 0.78
CXCL12P48061 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.95■□□□□ 0.78
CXCL12P48061 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL12P48061 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.95■□□□□ 0.78
CXCL12P48061 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL12P48061 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.95■□□□□ 0.78
CXCL12P48061 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.95■□□□□ 0.78
CXCL12P48061 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL12P48061 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL12P48061 AC131212.4-201ENST00000623606 975 ntBASIC19.95■□□□□ 0.78
CXCL12P48061 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CXCL12P48061 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CXCL12P48061 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL12P48061 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms