Protein–RNA interactions for Protein: P47976

CTH1, mRNA decay factor CTH1, yeastyeast

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTH1P47976 RTP1YMR185W 2946 nt2.05□□□□□ -2.08
CTH1P47976 SKI3YPR189W 4299 nt2.05□□□□□ -2.08
CTH1P47976 YPR097WYPR097W 3222 nt2.05□□□□□ -2.08
CTH1P47976 SMC1YFL008W 3678 nt2.04□□□□□ -2.08
CTH1P47976 ORC3YLL004W 1851 nt2.03□□□□□ -2.08
CTH1P47976 PET309YLR067C 2898 nt2.03□□□□□ -2.08
CTH1P47976 GCN2YDR283C 4980 nt2.03□□□□□ -2.08
CTH1P47976 DNF3YMR162C 4971 nt2.02□□□□□ -2.09
CTH1P47976 RGA1YOR127W 3024 nt2.01□□□□□ -2.09
CTH1P47976 ASE1YOR058C 2658 nt2.01□□□□□ -2.09
CTH1P47976 RTT101YJL047C 2529 nt2.01□□□□□ -2.09
CTH1P47976 TIM9YEL020W-A 264 nt2□□□□□ -2.09
CTH1P47976 POL5YEL055C 3069 nt2□□□□□ -2.09
CTH1P47976 LAA1YJL207C 6045 nt1.99□□□□□ -2.09
CTH1P47976 MGA2YIR033W 3342 nt1.99□□□□□ -2.09
CTH1P47976 snR75snR75 89 nt1.97□□□□□ -2.09
CTH1P47976 YLR286W-AYLR286W-A 135 nt1.97□□□□□ -2.09
CTH1P47976 MSH6YDR097C 3729 nt1.96□□□□□ -2.09
CTH1P47976 SPO24YPR036W-A 204 nt1.96□□□□□ -2.1
CTH1P47976 YOR093CYOR093C 4947 nt1.94□□□□□ -2.1
CTH1P47976 PIK1YNL267W 3201 nt1.94□□□□□ -2.1
CTH1P47976 CLU1YMR012W 3834 nt1.94□□□□□ -2.1
CTH1P47976 SEC10YLR166C 2616 nt1.93□□□□□ -2.1
CTH1P47976 NOP9YJL010C 2001 nt1.93□□□□□ -2.1
CTH1P47976 YLR041WYLR041W 321 nt1.93□□□□□ -2.1
CTH1P47976 YBR200W-AYBR200W-A 165 nt1.93□□□□□ -2.1
CTH1P47976 SAC3YDR159W 3906 nt1.92□□□□□ -2.1
CTH1P47976 YKL096C-BYKL096C-B 150 nt1.92□□□□□ -2.1
CTH1P47976 MMS4YBR098W 2076 nt1.92□□□□□ -2.1
CTH1P47976 YAR009CYAR009C 3591 nt1.91□□□□□ -2.1
CTH1P47976 NUT1YGL151W 3399 nt1.91□□□□□ -2.1
CTH1P47976 ALY2YJL084C 3141 nt1.91□□□□□ -2.1
CTH1P47976 BPH1YCR032W 6504 nt1.91□□□□□ -2.1
CTH1P47976 YKL225WYKL225W 348 nt1.9□□□□□ -2.11
CTH1P47976 HIR3YJR140C 4947 nt1.9□□□□□ -2.11
CTH1P47976 RPL26BYGR034W 384 nt1.89□□□□□ -2.11
CTH1P47976 RPM2YML091C 3609 nt1.88□□□□□ -2.11
CTH1P47976 FYV8YGR196C 2454 nt1.88□□□□□ -2.11
CTH1P47976 PAN2YGL094C 3348 nt1.88□□□□□ -2.11
CTH1P47976 BEM3YPL115C 3387 nt1.88□□□□□ -2.11
CTH1P47976 YLR422WYLR422W 5799 nt1.87□□□□□ -2.11
CTH1P47976 RAD50YNL250W 3939 nt1.87□□□□□ -2.11
CTH1P47976 MYO2YOR326W 4725 nt1.87□□□□□ -2.11
CTH1P47976 YCS4YLR272C 3531 nt1.86□□□□□ -2.11
CTH1P47976 YLR149C-AYLR149C-A 87 nt1.86□□□□□ -2.11
CTH1P47976 snR190snR190 190 nt1.86□□□□□ -2.11
CTH1P47976 UTP21YLR409C 2820 nt1.86□□□□□ -2.11
CTH1P47976 IML1YJR138W 4755 nt1.85□□□□□ -2.11
CTH1P47976 AZF1YOR113W 2745 nt1.85□□□□□ -2.11
CTH1P47976 WAR1YML076C 2835 nt1.84□□□□□ -2.12
CTH1P47976 EMC5YIL027C 426 nt1.82□□□□□ -2.12
CTH1P47976 UBP3YER151C 2739 nt1.82□□□□□ -2.12
CTH1P47976 tF(GAA)BtF(GAA)B 73 nt1.81□□□□□ -2.12
CTH1P47976 tF(GAA)FtF(GAA)F 73 nt1.81□□□□□ -2.12
CTH1P47976 tF(GAA)GtF(GAA)G 73 nt1.81□□□□□ -2.12
CTH1P47976 tF(GAA)H1tF(GAA)H1 73 nt1.81□□□□□ -2.12
CTH1P47976 tF(GAA)H2tF(GAA)H2 73 nt1.81□□□□□ -2.12
CTH1P47976 tF(GAA)MtF(GAA)M 73 nt1.81□□□□□ -2.12
CTH1P47976 tF(GAA)P1tF(GAA)P1 73 nt1.81□□□□□ -2.12
CTH1P47976 tF(GAA)P2tF(GAA)P2 73 nt1.81□□□□□ -2.12
CTH1P47976 YLR299C-AYLR299C-A 93 nt1.81□□□□□ -2.12
CTH1P47976 ATG9YDL149W 2994 nt1.81□□□□□ -2.12
CTH1P47976 YHR214C-BYHR214C-B 5382 nt1.8□□□□□ -2.12
CTH1P47976 RAD9YDR217C 3930 nt1.8□□□□□ -2.12
CTH1P47976 USO1YDL058W 5373 nt1.79□□□□□ -2.12
CTH1P47976 tD(GUC)QtD(GUC)Q 75 nt1.78□□□□□ -2.12
CTH1P47976 YMR247W-AYMR247W-A 144 nt1.78□□□□□ -2.12
CTH1P47976 YDL073WYDL073W 2955 nt1.78□□□□□ -2.12
CTH1P47976 NNF2YGR089W 2811 nt1.78□□□□□ -2.12
CTH1P47976 GEA2YEL022W 4380 nt1.77□□□□□ -2.13
CTH1P47976 KCS1YDR017C 3153 nt1.77□□□□□ -2.13
CTH1P47976 MEC1YBR136W 7107 nt1.76□□□□□ -2.13
CTH1P47976 ROM2YLR371W 4071 nt1.76□□□□□ -2.13
CTH1P47976 snR14snR14 160 nt1.75□□□□□ -2.13
CTH1P47976 SMC4YLR086W 4257 nt1.74□□□□□ -2.13
CTH1P47976 YDL159W-AYDL159W-A 132 nt1.74□□□□□ -2.13
CTH1P47976 tT(UGU)HtT(UGU)H 72 nt1.74□□□□□ -2.13
CTH1P47976 FIG2YCR089W 4830 nt1.74□□□□□ -2.13
CTH1P47976 PRP16YKR086W 3216 nt1.74□□□□□ -2.13
CTH1P47976 RPL41AYDL184C 78 nt1.73□□□□□ -2.13
CTH1P47976 YMR045CYMR045C 5268 nt1.73□□□□□ -2.13
CTH1P47976 UBR2YLR024C 5619 nt1.72□□□□□ -2.13
CTH1P47976 YDL159C-BYDL159C-B 177 nt1.72□□□□□ -2.13
CTH1P47976 SKI7YOR076C 2244 nt1.71□□□□□ -2.14
CTH1P47976 STO1YMR125W 2586 nt1.71□□□□□ -2.14
CTH1P47976 TRM732YMR259C 4263 nt1.71□□□□□ -2.14
CTH1P47976 YHR180C-BYHR180C-B 105 nt1.71□□□□□ -2.14
CTH1P47976 YPR160W-AYPR160W-A 81 nt1.71□□□□□ -2.14
CTH1P47976 CDC25YLR310C 4770 nt1.71□□□□□ -2.14
CTH1P47976 tH(GUG)E1tH(GUG)E1 72 nt1.7□□□□□ -2.14
CTH1P47976 tH(GUG)E2tH(GUG)E2 72 nt1.7□□□□□ -2.14
CTH1P47976 tH(GUG)G1tH(GUG)G1 72 nt1.7□□□□□ -2.14
CTH1P47976 tH(GUG)G2tH(GUG)G2 72 nt1.7□□□□□ -2.14
CTH1P47976 tH(GUG)HtH(GUG)H 72 nt1.7□□□□□ -2.14
CTH1P47976 tH(GUG)KtH(GUG)K 72 nt1.7□□□□□ -2.14
CTH1P47976 tH(GUG)MtH(GUG)M 72 nt1.7□□□□□ -2.14
CTH1P47976 YLR419WYLR419W 4308 nt1.69□□□□□ -2.14
CTH1P47976 tQ(UUG)E2tQ(UUG)E2 72 nt1.69□□□□□ -2.14
CTH1P47976 YML054C-AYML054C-A 159 nt1.68□□□□□ -2.14
CTH1P47976 EST1YLR233C 2100 nt1.67□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 62.5 ms