Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR1P43307 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
SSR1P43307 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SSR1P43307 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR1P43307 CYP21A1P-202ENST00000354927 1481 ntBASIC21.19■□□□□ 0.98
SSR1P43307 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR1P43307 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.19■□□□□ 0.98
SSR1P43307 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.19■□□□□ 0.98
SSR1P43307 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR1P43307 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR1P43307 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.18■□□□□ 0.98
SSR1P43307 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR1P43307 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR1P43307 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.18■□□□□ 0.98
SSR1P43307 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR1P43307 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.18■□□□□ 0.98
SSR1P43307 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.18■□□□□ 0.98
SSR1P43307 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR1P43307 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR1P43307 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR1P43307 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.18■□□□□ 0.98
SSR1P43307 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.18■□□□□ 0.98
SSR1P43307 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.18■□□□□ 0.98
SSR1P43307 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SSR1P43307 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR1P43307 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.18■□□□□ 0.98
SSR1P43307 AC087633.2-202ENST00000565166 1439 ntBASIC21.18■□□□□ 0.98
SSR1P43307 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR1P43307 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR1P43307 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.17■□□□□ 0.98
SSR1P43307 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SSR1P43307 AC007322.4-201ENST00000509611 723 ntBASIC21.17■□□□□ 0.98
SSR1P43307 DUX4L16-201ENST00000555130 1264 ntBASIC21.17■□□□□ 0.98
SSR1P43307 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.17■□□□□ 0.98
SSR1P43307 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SSR1P43307 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.17■□□□□ 0.98
SSR1P43307 BID-214ENST00000617586 542 ntTSL 5 BASIC21.17■□□□□ 0.98
SSR1P43307 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR1P43307 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.17■□□□□ 0.98
SSR1P43307 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SSR1P43307 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR1P43307 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
SSR1P43307 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.17■□□□□ 0.98
SSR1P43307 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SSR1P43307 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SSR1P43307 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSR1P43307 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSR1P43307 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSR1P43307 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SSR1P43307 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.16■□□□□ 0.98
SSR1P43307 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSR1P43307 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSR1P43307 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SSR1P43307 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSR1P43307 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SSR1P43307 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SSR1P43307 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSR1P43307 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.15■□□□□ 0.98
SSR1P43307 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR1P43307 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSR1P43307 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SSR1P43307 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR1P43307 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR1P43307 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR1P43307 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.15■□□□□ 0.98
SSR1P43307 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.15■□□□□ 0.98
SSR1P43307 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.15■□□□□ 0.98
SSR1P43307 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.15■□□□□ 0.98
SSR1P43307 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SSR1P43307 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR1P43307 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR1P43307 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.15■□□□□ 0.98
SSR1P43307 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSR1P43307 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SSR1P43307 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.14■□□□□ 0.98
SSR1P43307 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSR1P43307 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSR1P43307 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.14■□□□□ 0.98
SSR1P43307 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSR1P43307 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSR1P43307 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSR1P43307 TCF3P1-201ENST00000423021 1937 ntBASIC21.14■□□□□ 0.98
SSR1P43307 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSR1P43307 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSR1P43307 AC006015.1-201ENST00000429970 570 ntBASIC21.14■□□□□ 0.97
SSR1P43307 CNN2P6-201ENST00000439038 900 ntBASIC21.14■□□□□ 0.97
SSR1P43307 AL162412.1-201ENST00000567129 965 ntBASIC21.14■□□□□ 0.97
SSR1P43307 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.14■□□□□ 0.97
SSR1P43307 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.14■□□□□ 0.97
SSR1P43307 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SSR1P43307 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SSR1P43307 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.14■□□□□ 0.97
SSR1P43307 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSR1P43307 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSR1P43307 AC068338.2-201ENST00000563278 1430 ntBASIC21.13■□□□□ 0.97
SSR1P43307 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
SSR1P43307 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms